Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 HMGB1P1-201ENST00000522557 636 ntBASIC1.47□□□□□ -2.17
RPS28P62857 IGHVIII-11-1-201ENST00000522733 267 ntBASIC1.47□□□□□ -2.17
RPS28P62857 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.47□□□□□ -2.17
RPS28P62857 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.47□□□□□ -2.17
RPS28P62857 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RPS28P62857 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC1.47□□□□□ -2.17
RPS28P62857 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC1.47□□□□□ -2.17
RPS28P62857 LINC00933-203ENST00000559812 219 ntBASIC1.47□□□□□ -2.17
RPS28P62857 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC1.47□□□□□ -2.17
RPS28P62857 MIR3667-201ENST00000581025 74 ntBASIC1.47□□□□□ -2.17
RPS28P62857 AC068276.1-201ENST00000605793 379 ntBASIC1.47□□□□□ -2.17
RPS28P62857 RNU1-30P-201ENST00000606575 163 ntBASIC1.47□□□□□ -2.17
RPS28P62857 AC069294.1-201ENST00000608397 350 ntBASIC1.47□□□□□ -2.17
RPS28P62857 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC1.47□□□□□ -2.17
RPS28P62857 AC112484.5-201ENST00000624189 228 ntBASIC1.47□□□□□ -2.17
RPS28P62857 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
RPS28P62857 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RPS28P62857 OR4G11P-202ENST00000642116 1414 ntBASIC1.47□□□□□ -2.17
RPS28P62857 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
RPS28P62857 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
RPS28P62857 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC1.46□□□□□ -2.18
RPS28P62857 ANKRD36P1-201ENST00000344424 659 ntBASIC1.46□□□□□ -2.18
RPS28P62857 RNU6-1159P-201ENST00000362933 107 ntBASIC1.46□□□□□ -2.18
RPS28P62857 RNA5SP284-201ENST00000384547 118 ntBASIC1.46□□□□□ -2.18
RPS28P62857 U3.25-201ENST00000391209 220 ntBASIC1.46□□□□□ -2.18
RPS28P62857 RNA5SP338-201ENST00000410495 85 ntBASIC1.46□□□□□ -2.18
RPS28P62857 AL161449.1-201ENST00000414531 1199 ntBASIC1.46□□□□□ -2.18
RPS28P62857 AC108032.1-201ENST00000416706 207 ntBASIC1.46□□□□□ -2.18
RPS28P62857 AC091390.3-201ENST00000426478 338 ntBASIC1.46□□□□□ -2.18
RPS28P62857 TBCAP1-201ENST00000436520 327 ntBASIC1.46□□□□□ -2.18
RPS28P62857 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC1.46□□□□□ -2.18
RPS28P62857 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.46□□□□□ -2.18
RPS28P62857 TPT1P14-201ENST00000448018 505 ntBASIC1.46□□□□□ -2.18
RPS28P62857 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.46□□□□□ -2.18
RPS28P62857 RPL7P19-201ENST00000469948 618 ntBASIC1.46□□□□□ -2.18
RPS28P62857 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.46□□□□□ -2.18
RPS28P62857 AL049874.1-201ENST00000489560 388 ntBASIC1.46□□□□□ -2.18
RPS28P62857 AC011853.1-201ENST00000518911 454 ntBASIC1.46□□□□□ -2.18
RPS28P62857 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.46□□□□□ -2.18
RPS28P62857 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.46□□□□□ -2.18
RPS28P62857 CBX3P7-201ENST00000532876 502 ntBASIC1.46□□□□□ -2.18
RPS28P62857 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC1.46□□□□□ -2.18
RPS28P62857 AC124947.2-202ENST00000552735 133 ntBASIC1.46□□□□□ -2.18
RPS28P62857 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC1.46□□□□□ -2.18
RPS28P62857 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC1.46□□□□□ -2.18
RPS28P62857 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.46□□□□□ -2.18
RPS28P62857 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
RPS28P62857 SNORD39.3-201ENST00000584451 71 ntBASIC1.46□□□□□ -2.18
RPS28P62857 OR7E18P-201ENST00000592589 702 ntBASIC1.46□□□□□ -2.18
RPS28P62857 AC008121.1-201ENST00000603244 268 ntBASIC1.46□□□□□ -2.18
RPS28P62857 AC115286.1-201ENST00000604298 434 ntBASIC1.46□□□□□ -2.18
RPS28P62857 AC080013.4-201ENST00000607624 649 ntBASIC1.46□□□□□ -2.18
RPS28P62857 DUXAP10-204ENST00000612052 616 ntBASIC1.46□□□□□ -2.18
RPS28P62857 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC1.46□□□□□ -2.18
RPS28P62857 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC1.46□□□□□ -2.18
RPS28P62857 AC026124.2-201ENST00000621847 656 ntBASIC1.46□□□□□ -2.18
RPS28P62857 MIR6807-201ENST00000621968 92 ntBASIC1.46□□□□□ -2.18
RPS28P62857 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
RPS28P62857 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
RPS28P62857 ELF2P3-201ENST00000445099 1506 ntBASIC1.45□□□□□ -2.18
RPS28P62857 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
RPS28P62857 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
RPS28P62857 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.45□□□□□ -2.18
RPS28P62857 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
RPS28P62857 RNA5SP183-201ENST00000362452 119 ntBASIC1.45□□□□□ -2.18
RPS28P62857 RN7SKP95-201ENST00000362860 303 ntBASIC1.45□□□□□ -2.18
RPS28P62857 RNU4-42P-201ENST00000364738 142 ntBASIC1.45□□□□□ -2.18
RPS28P62857 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
RPS28P62857 MIR135A2-201ENST00000384854 100 ntBASIC1.45□□□□□ -2.18
RPS28P62857 MIR223-201ENST00000385204 110 ntBASIC1.45□□□□□ -2.18
RPS28P62857 AL450338.1-201ENST00000407987 512 ntBASIC1.45□□□□□ -2.18
RPS28P62857 RNU6ATAC7P-201ENST00000408111 127 ntBASIC1.45□□□□□ -2.18
RPS28P62857 SNORA11.3-201ENST00000408471 128 ntBASIC1.45□□□□□ -2.18
RPS28P62857 AL133384.1-201ENST00000412744 351 ntBASIC1.45□□□□□ -2.18
RPS28P62857 SYF2P2-201ENST00000417620 583 ntBASIC1.45□□□□□ -2.18
RPS28P62857 AC093162.1-201ENST00000419682 124 ntBASIC1.45□□□□□ -2.18
RPS28P62857 AC003685.2-201ENST00000422795 395 ntBASIC1.45□□□□□ -2.18
RPS28P62857 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC1.45□□□□□ -2.18
RPS28P62857 AC096920.1-201ENST00000423991 241 ntBASIC1.45□□□□□ -2.18
RPS28P62857 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.45□□□□□ -2.18
RPS28P62857 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.45□□□□□ -2.18
RPS28P62857 BTF3P10-201ENST00000433415 495 ntBASIC1.45□□□□□ -2.18
RPS28P62857 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.45□□□□□ -2.18
RPS28P62857 RPL26P6-201ENST00000440913 438 ntBASIC1.45□□□□□ -2.18
RPS28P62857 RPL23AP3-201ENST00000453844 468 ntBASIC1.45□□□□□ -2.18
RPS28P62857 snoU109.1-201ENST00000459339 135 ntBASIC1.45□□□□□ -2.18
RPS28P62857 RPL21P126-201ENST00000470049 478 ntBASIC1.45□□□□□ -2.18
RPS28P62857 RPL23AP41-201ENST00000484754 458 ntBASIC1.45□□□□□ -2.18
RPS28P62857 AC098591.2-201ENST00000510152 315 ntBASIC1.45□□□□□ -2.18
RPS28P62857 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC1.45□□□□□ -2.18
RPS28P62857 AC091965.2-201ENST00000512324 613 ntBASIC1.45□□□□□ -2.18
RPS28P62857 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC1.45□□□□□ -2.18
RPS28P62857 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RPS28P62857 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC1.45□□□□□ -2.18
RPS28P62857 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.45□□□□□ -2.18
RPS28P62857 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.45□□□□□ -2.18
RPS28P62857 AC015726.1-201ENST00000602353 681 ntBASIC1.45□□□□□ -2.18
RPS28P62857 AC008277.2-201ENST00000605196 797 ntBASIC1.45□□□□□ -2.18
RPS28P62857 AC106052.1-201ENST00000608029 497 ntBASIC1.45□□□□□ -2.18
RPS28P62857 AL159169.3-201ENST00000608871 561 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms