Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM3P62310 MTCYBP34-201ENST00000439552 670 ntBASIC1.85□□□□□ -2.11
LSM3P62310 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.85□□□□□ -2.11
LSM3P62310 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.85□□□□□ -2.11
LSM3P62310 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM3P62310 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM3P62310 RBM43P1-201ENST00000476891 1081 ntBASIC1.85□□□□□ -2.11
LSM3P62310 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM3P62310 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM3P62310 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM3P62310 AL049838.1-201ENST00000563647 981 ntBASIC1.85□□□□□ -2.11
LSM3P62310 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM3P62310 MIR6810-201ENST00000622701 70 ntBASIC1.85□□□□□ -2.11
LSM3P62310 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.85□□□□□ -2.11
LSM3P62310 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
LSM3P62310 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.85□□□□□ -2.11
LSM3P62310 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LSM3P62310 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
LSM3P62310 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LSM3P62310 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
LSM3P62310 RNA5SP489-201ENST00000410986 109 ntBASIC1.84□□□□□ -2.11
LSM3P62310 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.84□□□□□ -2.11
LSM3P62310 RPL7P30-201ENST00000420888 709 ntBASIC1.84□□□□□ -2.11
LSM3P62310 PTP4A1P7-201ENST00000423476 514 ntBASIC1.84□□□□□ -2.11
LSM3P62310 AC096632.1-201ENST00000427395 310 ntBASIC1.84□□□□□ -2.11
LSM3P62310 AC097499.1-201ENST00000444277 208 ntBASIC1.84□□□□□ -2.11
LSM3P62310 IFNA11P-201ENST00000446352 526 ntBASIC1.84□□□□□ -2.11
LSM3P62310 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.84□□□□□ -2.11
LSM3P62310 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.84□□□□□ -2.11
LSM3P62310 AC080014.1-201ENST00000496877 1201 ntBASIC1.84□□□□□ -2.11
LSM3P62310 AC025459.1-201ENST00000504072 156 ntBASIC1.84□□□□□ -2.11
LSM3P62310 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.84□□□□□ -2.11
LSM3P62310 AC096571.1-202ENST00000506634 735 ntBASIC1.84□□□□□ -2.11
LSM3P62310 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.84□□□□□ -2.11
LSM3P62310 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.84□□□□□ -2.11
LSM3P62310 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC1.84□□□□□ -2.11
LSM3P62310 AC092470.1-201ENST00000546187 132 ntBASIC1.84□□□□□ -2.11
LSM3P62310 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.84□□□□□ -2.11
LSM3P62310 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC1.84□□□□□ -2.11
LSM3P62310 MIR4325-201ENST00000583049 90 ntBASIC1.84□□□□□ -2.11
LSM3P62310 AL590099.1-201ENST00000615276 138 ntBASIC1.84□□□□□ -2.11
LSM3P62310 AL450472.3-201ENST00000615578 367 ntBASIC1.84□□□□□ -2.11
LSM3P62310 AL138880.2-201ENST00000616214 239 ntBASIC1.84□□□□□ -2.11
LSM3P62310 AC084757.4-201ENST00000616350 526 ntBASIC1.84□□□□□ -2.11
LSM3P62310 MIR6132-201ENST00000622083 109 ntBASIC1.84□□□□□ -2.11
LSM3P62310 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
LSM3P62310 AC097372.4-201ENST00000625025 466 ntBASIC1.84□□□□□ -2.11
LSM3P62310 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
LSM3P62310 KPNA2P1-201ENST00000458289 1591 ntBASIC1.84□□□□□ -2.12
LSM3P62310 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
LSM3P62310 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
LSM3P62310 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.84□□□□□ -2.12
LSM3P62310 AC007342.9-201ENST00000623877 1385 ntBASIC1.84□□□□□ -2.12
LSM3P62310 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
LSM3P62310 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
LSM3P62310 CENPCP1-201ENST00000533085 2578 ntBASIC1.83□□□□□ -2.12
LSM3P62310 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
LSM3P62310 RNU6-670P-201ENST00000364312 104 ntBASIC1.83□□□□□ -2.12
LSM3P62310 MIR421-201ENST00000365696 85 ntBASIC1.83□□□□□ -2.12
LSM3P62310 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
LSM3P62310 SNORA1.3-201ENST00000384676 136 ntBASIC1.83□□□□□ -2.12
LSM3P62310 MIR196B-201ENST00000384852 84 ntBASIC1.83□□□□□ -2.12
LSM3P62310 TAS2R15P-201ENST00000390674 928 ntBASIC1.83□□□□□ -2.12
LSM3P62310 SNORA48.3-201ENST00000391081 134 ntBASIC1.83□□□□□ -2.12
LSM3P62310 AL030996.1-201ENST00000411430 235 ntBASIC1.83□□□□□ -2.12
LSM3P62310 AC007064.1-201ENST00000412238 351 ntBASIC1.83□□□□□ -2.12
LSM3P62310 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.83□□□□□ -2.12
LSM3P62310 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.83□□□□□ -2.12
LSM3P62310 AJ239321.1-201ENST00000424255 564 ntBASIC1.83□□□□□ -2.12
LSM3P62310 AC027124.2-201ENST00000428249 105 ntBASIC1.83□□□□□ -2.12
LSM3P62310 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.83□□□□□ -2.12
LSM3P62310 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.83□□□□□ -2.12
LSM3P62310 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.83□□□□□ -2.12
LSM3P62310 MRPL35P4-201ENST00000453682 566 ntBASIC1.83□□□□□ -2.12
LSM3P62310 RN7SL636P-201ENST00000497504 294 ntBASIC1.83□□□□□ -2.12
LSM3P62310 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.83□□□□□ -2.12
LSM3P62310 AC002456.2-201ENST00000509356 380 ntBASIC1.83□□□□□ -2.12
LSM3P62310 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LSM3P62310 AC108157.1-201ENST00000510511 539 ntBASIC1.83□□□□□ -2.12
LSM3P62310 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.83□□□□□ -2.12
LSM3P62310 RNA5SP200-201ENST00000516360 103 ntBASIC1.83□□□□□ -2.12
LSM3P62310 RNA5SP148-201ENST00000516527 94 ntBASIC1.83□□□□□ -2.12
LSM3P62310 RPL7P20-201ENST00000520308 745 ntBASIC1.83□□□□□ -2.12
LSM3P62310 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.83□□□□□ -2.12
LSM3P62310 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LSM3P62310 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LSM3P62310 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.83□□□□□ -2.12
LSM3P62310 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.83□□□□□ -2.12
LSM3P62310 AL442163.2-201ENST00000553912 710 ntBASIC1.83□□□□□ -2.12
LSM3P62310 AC090888.1-201ENST00000561335 1141 ntBASIC1.83□□□□□ -2.12
LSM3P62310 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
LSM3P62310 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
LSM3P62310 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LSM3P62310 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.82□□□□□ -2.12
LSM3P62310 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
LSM3P62310 RNU6-761P-201ENST00000384148 107 ntBASIC1.82□□□□□ -2.12
LSM3P62310 RNU4-31P-201ENST00000384211 141 ntBASIC1.82□□□□□ -2.12
LSM3P62310 RNU6-1226P-201ENST00000384317 107 ntBASIC1.82□□□□□ -2.12
LSM3P62310 MIR34B-201ENST00000385076 84 ntBASIC1.82□□□□□ -2.12
LSM3P62310 Y_RNA.625-201ENST00000411256 107 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms