Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.6□□□□□ -1.83
SEC61A1P61619 TVP23BP1-201ENST00000557500 617 ntBASIC3.6□□□□□ -1.83
SEC61A1P61619 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.6□□□□□ -1.83
SEC61A1P61619 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.6□□□□□ -1.83
SEC61A1P61619 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.6□□□□□ -1.83
SEC61A1P61619 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.6□□□□□ -1.83
SEC61A1P61619 AL359999.1-201ENST00000604513 294 ntBASIC3.6□□□□□ -1.83
SEC61A1P61619 AC080013.4-201ENST00000607624 649 ntBASIC3.6□□□□□ -1.83
SEC61A1P61619 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.6□□□□□ -1.83
SEC61A1P61619 AC105429.2-201ENST00000610567 517 ntBASIC3.6□□□□□ -1.83
SEC61A1P61619 AC064801.1-201ENST00000612025 407 ntBASIC3.6□□□□□ -1.83
SEC61A1P61619 AL021997.2-201ENST00000615674 271 ntBASIC3.6□□□□□ -1.83
SEC61A1P61619 AL359880.1-201ENST00000621879 266 ntBASIC3.6□□□□□ -1.83
SEC61A1P61619 MIR3653-201ENST00000625572 110 ntBASIC3.6□□□□□ -1.83
SEC61A1P61619 AC019226.1-201ENST00000625666 515 ntBASIC3.6□□□□□ -1.83
SEC61A1P61619 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SEC61A1P61619 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SEC61A1P61619 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.6□□□□□ -1.83
SEC61A1P61619 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SEC61A1P61619 NMD3P1-201ENST00000439704 1488 ntBASIC3.6□□□□□ -1.83
SEC61A1P61619 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SEC61A1P61619 ZNF734P-201ENST00000419494 1534 ntBASIC3.6□□□□□ -1.83
SEC61A1P61619 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A1P61619 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A1P61619 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.59□□□□□ -1.83
SEC61A1P61619 AC090229.1-201ENST00000590983 1609 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.59□□□□□ -1.83
SEC61A1P61619 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
SEC61A1P61619 AL139811.1-201ENST00000424779 2299 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 NUP58P1-201ENST00000502546 1738 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A1P61619 NCAPGP1-201ENST00000505112 1814 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A1P61619 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A1P61619 OR5J1P-201ENST00000313544 939 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SEC61A1P61619 Y_RNA.9-201ENST00000362354 101 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 RNU6-28P-201ENST00000362378 107 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 U3.29-201ENST00000391296 212 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.59□□□□□ -1.83
SEC61A1P61619 RPL7P25-201ENST00000404151 721 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 RAP1BP3-201ENST00000407180 549 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 Z98941.1-201ENST00000407764 100 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 RNA5SP36-201ENST00000410197 133 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 AC078974.1-201ENST00000411597 223 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 MTCYBP24-201ENST00000420387 1106 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 AL109913.1-201ENST00000421173 514 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A1P61619 RPL23AP38-201ENST00000423801 469 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.59□□□□□ -1.83
SEC61A1P61619 AL590233.1-201ENST00000430017 456 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 AC087650.1-201ENST00000431445 468 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A1P61619 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.59□□□□□ -1.83
SEC61A1P61619 AC104850.1-201ENST00000435940 476 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 HMGB1P31-201ENST00000437242 427 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.59□□□□□ -1.83
SEC61A1P61619 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.59□□□□□ -1.83
SEC61A1P61619 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.59□□□□□ -1.83
SEC61A1P61619 AC104563.1-201ENST00000476147 376 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.59□□□□□ -1.83
SEC61A1P61619 RN7SL691P-201ENST00000494487 301 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.59□□□□□ -1.83
SEC61A1P61619 AC104164.2-201ENST00000496953 495 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 TMEM248P1-201ENST00000510579 951 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 AC008958.1-201ENST00000511047 682 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 AC105914.1-201ENST00000511798 226 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 Y_RNA.672-201ENST00000516289 104 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 RNA5SP519-201ENST00000516480 119 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.59□□□□□ -1.83
SEC61A1P61619 OR8L1P-201ENST00000534005 955 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.59□□□□□ -1.83
SEC61A1P61619 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.59□□□□□ -1.83
SEC61A1P61619 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.59□□□□□ -1.83
SEC61A1P61619 MIR3682-201ENST00000581338 84 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 AC011451.2-201ENST00000604303 598 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A1P61619 HMGN2P28-201ENST00000606102 262 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 AL391813.2-201ENST00000609113 322 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 OR10AB1P-201ENST00000609613 938 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A1P61619 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A1P61619 AC007546.1-201ENST00000619452 559 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A1P61619 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
SEC61A1P61619 AC004009.2-201ENST00000623016 728 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 AC006065.5-201ENST00000623427 349 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 AC040168.1-201ENST00000623594 991 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 AC091905.1-201ENST00000624400 311 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.59□□□□□ -1.83
SEC61A1P61619 AC068724.3-201ENST00000625906 87 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.59□□□□□ -1.83
SEC61A1P61619 BMS1P21-201ENST00000634565 365 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SEC61A1P61619 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A1P61619 RPS4XP5-202ENST00000449995 1334 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 ZNF33CP-201ENST00000432492 2030 ntBASIC3.59□□□□□ -1.83
SEC61A1P61619 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SEC61A1P61619 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.59□□□□□ -1.83
SEC61A1P61619 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms