Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.7□□□□□ -1.82
RPS3AP61247 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.7□□□□□ -1.82
RPS3AP61247 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.7□□□□□ -1.82
RPS3AP61247 AC105224.1-201ENST00000587055 421 ntBASIC3.7□□□□□ -1.82
RPS3AP61247 AC083760.1-201ENST00000589621 670 ntBASIC3.7□□□□□ -1.82
RPS3AP61247 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.7□□□□□ -1.82
RPS3AP61247 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.7□□□□□ -1.82
RPS3AP61247 AC022146.1-201ENST00000595307 847 ntBASIC3.7□□□□□ -1.82
RPS3AP61247 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.7□□□□□ -1.82
RPS3AP61247 AC068790.3-201ENST00000602988 553 ntBASIC3.7□□□□□ -1.82
RPS3AP61247 AC004067.1-201ENST00000608733 700 ntBASIC3.7□□□□□ -1.82
RPS3AP61247 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.7□□□□□ -1.82
RPS3AP61247 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.7□□□□□ -1.82
RPS3AP61247 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
RPS3AP61247 AC012150.2-201ENST00000621300 544 ntBASIC3.7□□□□□ -1.82
RPS3AP61247 AC019226.1-201ENST00000625666 515 ntBASIC3.7□□□□□ -1.82
RPS3AP61247 ZNF833P-201ENST00000424938 1494 ntBASIC3.7□□□□□ -1.82
RPS3AP61247 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RPS3AP61247 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPS3AP61247 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.7□□□□□ -1.82
RPS3AP61247 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
RPS3AP61247 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPS3AP61247 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPS3AP61247 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RPS3AP61247 DDX10P1-201ENST00000448545 1933 ntBASIC3.7□□□□□ -1.82
RPS3AP61247 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.7□□□□□ -1.82
RPS3AP61247 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
RPS3AP61247 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
RPS3AP61247 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
RPS3AP61247 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.69□□□□□ -1.82
RPS3AP61247 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPS3AP61247 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPS3AP61247 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.69□□□□□ -1.82
RPS3AP61247 AP000567.1-201ENST00000406413 156 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 RNA5SP317-201ENST00000410176 116 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 RNA5SP311-201ENST00000411290 116 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 RPL17P12-201ENST00000413391 526 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 AL356095.1-201ENST00000417217 199 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.69□□□□□ -1.82
RPS3AP61247 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.69□□□□□ -1.82
RPS3AP61247 OR5BE1P-201ENST00000425977 939 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.69□□□□□ -1.82
RPS3AP61247 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.69□□□□□ -1.82
RPS3AP61247 AC006011.1-201ENST00000442758 349 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 TPT1P14-201ENST00000448018 505 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 NUTF2P7-201ENST00000453086 375 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.69□□□□□ -1.82
RPS3AP61247 AP000797.1-201ENST00000478870 387 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 AL132838.2-201ENST00000492041 314 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 CBX3P3-201ENST00000508108 532 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.69□□□□□ -1.82
RPS3AP61247 RN7SKP13-201ENST00000515933 244 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 RNA5SP315-201ENST00000516340 116 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 Y_RNA.688-201ENST00000516565 95 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 RNA5SP312-201ENST00000517068 116 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 AC025881.1-201ENST00000518851 512 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 AC008489.1-201ENST00000524271 483 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.69□□□□□ -1.82
RPS3AP61247 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 AL121766.1-201ENST00000547436 487 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.69□□□□□ -1.82
RPS3AP61247 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.69□□□□□ -1.82
RPS3AP61247 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.69□□□□□ -1.82
RPS3AP61247 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.69□□□□□ -1.82
RPS3AP61247 AC025627.2-201ENST00000576220 160 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.69□□□□□ -1.82
RPS3AP61247 RN7SL600P-201ENST00000581811 299 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.69□□□□□ -1.82
RPS3AP61247 AC104662.1-201ENST00000604448 511 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 AC004908.2-201ENST00000609090 574 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 OR10AB1P-201ENST00000609613 938 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 AC093838.1-201ENST00000613014 469 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 AL110115.1-201ENST00000614396 364 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.69□□□□□ -1.82
RPS3AP61247 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.69□□□□□ -1.82
RPS3AP61247 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.69□□□□□ -1.82
RPS3AP61247 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.69□□□□□ -1.82
RPS3AP61247 OR5BE1P-202ENST00000641168 1176 ntBASIC3.69□□□□□ -1.82
RPS3AP61247 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RPS3AP61247 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RPS3AP61247 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPS3AP61247 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPS3AP61247 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.69□□□□□ -1.82
RPS3AP61247 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RPS3AP61247 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPS3AP61247 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RPS3AP61247 AL138713.1-201ENST00000624026 2130 ntBASIC3.68□□□□□ -1.82
RPS3AP61247 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
RPS3AP61247 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPS3AP61247 AC002546.1-201ENST00000588041 2504 ntBASIC3.68□□□□□ -1.82
RPS3AP61247 Y_RNA.46-201ENST00000362695 102 ntBASIC3.68□□□□□ -1.82
RPS3AP61247 SNORD35B-201ENST00000363660 87 ntBASIC3.68□□□□□ -1.82
RPS3AP61247 RNA5SP130-201ENST00000364431 114 ntBASIC3.68□□□□□ -1.82
RPS3AP61247 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
RPS3AP61247 RNU6-809P-201ENST00000384461 107 ntBASIC3.68□□□□□ -1.82
RPS3AP61247 RNU1-13P-201ENST00000384499 162 ntBASIC3.68□□□□□ -1.82
RPS3AP61247 MT-TH-201ENST00000387441 69 ntBASIC3.68□□□□□ -1.82
RPS3AP61247 MTCYBP36-201ENST00000404146 440 ntBASIC3.68□□□□□ -1.82
RPS3AP61247 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RPS3AP61247 RN7SKP285-201ENST00000410137 318 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms