Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RN7SKP226-201ENST00000364912 300 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 U8.8-201ENST00000365399 135 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 MIR142-201ENST00000384835 87 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.8□□□□□ -2.12
CKS1BP61024 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CKS1BP61024 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.8□□□□□ -2.12
CKS1BP61024 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.8□□□□□ -2.12
CKS1BP61024 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.8□□□□□ -2.12
CKS1BP61024 OSTCP8-201ENST00000445117 448 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.8□□□□□ -2.12
CKS1BP61024 snoU13.28-201ENST00000459235 104 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 COL6A4P2-205ENST00000509855 506 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.8□□□□□ -2.12
CKS1BP61024 AC034159.1-201ENST00000513885 583 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.8□□□□□ -2.12
CKS1BP61024 AC016550.3-201ENST00000515706 767 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 SNORA74D-201ENST00000516404 141 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.8□□□□□ -2.12
CKS1BP61024 AC010306.1-201ENST00000523223 1117 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 OR4V1P-201ENST00000525394 1140 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.8□□□□□ -2.12
CKS1BP61024 AC034105.4-201ENST00000568304 277 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.8□□□□□ -2.12
CKS1BP61024 AC005498.1-201ENST00000592125 465 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC1.8□□□□□ -2.12
CKS1BP61024 AP004247.3-201ENST00000608682 624 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 OR10AB1P-201ENST00000609613 938 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 AP001486.3-201ENST00000615334 372 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 VN1R7P-201ENST00000619242 903 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.8□□□□□ -2.12
CKS1BP61024 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.8□□□□□ -2.12
CKS1BP61024 RNU6-386P-201ENST00000362650 107 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 RNU1-100P-201ENST00000365255 165 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
CKS1BP61024 MIR134-201ENST00000385258 73 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 AL122016.1-201ENST00000403365 367 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 AL024507.1-201ENST00000412741 274 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.79□□□□□ -2.12
CKS1BP61024 AJ239321.1-201ENST00000424255 564 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.79□□□□□ -2.12
CKS1BP61024 RPS12P2-201ENST00000439728 269 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.79□□□□□ -2.12
CKS1BP61024 FGF7P5-201ENST00000441829 291 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 MTCYBP3-201ENST00000445588 1137 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.79□□□□□ -2.12
CKS1BP61024 MRPL35P4-201ENST00000453682 566 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 AC107626.1-201ENST00000471084 183 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 AC090453.1-201ENST00000495560 436 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 AC074250.1-201ENST00000511117 192 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 AC008413.1-201ENST00000511864 177 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 CASP1P1-201ENST00000526345 212 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.79□□□□□ -2.12
CKS1BP61024 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC1.79□□□□□ -2.12
CKS1BP61024 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.79□□□□□ -2.12
CKS1BP61024 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.79□□□□□ -2.12
CKS1BP61024 MIR5092-201ENST00000583139 88 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 MIR3158-1-201ENST00000583596 81 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 AC103710.4-201ENST00000609301 899 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.79□□□□□ -2.12
CKS1BP61024 SDR42E1P2-201ENST00000614861 481 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 SDR42E1P4-201ENST00000620894 481 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 ZNF720P1-201ENST00000562403 1939 ntBASIC1.79□□□□□ -2.12
CKS1BP61024 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CKS1BP61024 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.79□□□□□ -2.12
CKS1BP61024 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CKS1BP61024 MTND4P1-201ENST00000457501 1466 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 MTND5P1-201ENST00000445440 1375 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 Y_RNA.126-201ENST00000363382 111 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 SNORA51.12-201ENST00000384448 134 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CKS1BP61024 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.78□□□□□ -2.12
CKS1BP61024 AC010385.1-201ENST00000412374 256 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.78□□□□□ -2.12
CKS1BP61024 AC004866.2-201ENST00000438285 481 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.78□□□□□ -2.12
CKS1BP61024 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.78□□□□□ -2.12
CKS1BP61024 RNU7-23P-201ENST00000459465 62 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.78□□□□□ -2.12
CKS1BP61024 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.78□□□□□ -2.12
CKS1BP61024 AC008676.3-201ENST00000521237 435 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 AC100870.1-201ENST00000522035 505 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 AC025857.1-201ENST00000525252 377 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 OR5AQ1P-201ENST00000527596 927 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.78□□□□□ -2.12
CKS1BP61024 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.78□□□□□ -2.12
CKS1BP61024 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.78□□□□□ -2.12
CKS1BP61024 AC017100.2-201ENST00000584628 355 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.78□□□□□ -2.12
CKS1BP61024 AC124312.4-201ENST00000605533 310 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 AC006133.1-201ENST00000617106 264 ntBASIC1.78□□□□□ -2.12
CKS1BP61024 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.78□□□□□ -2.12
CKS1BP61024 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CKS1BP61024 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CKS1BP61024 DDX10P1-201ENST00000448545 1933 ntBASIC1.78□□□□□ -2.13
CKS1BP61024 CCT4P2-201ENST00000233836 1548 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CKS1BP61024 RNU6-670P-201ENST00000364312 104 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms