Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.16□□□□□ -1.74
CLRN1P58418 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN1P58418 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN1P58418 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLRN1P58418 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLRN1P58418 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN1P58418 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN1P58418 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.16□□□□□ -1.74
CLRN1P58418 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN1P58418 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN1P58418 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN1P58418 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CLRN1P58418 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN1P58418 AC073343.1-201ENST00000328239 651 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 Y_RNA.58-201ENST00000362807 102 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 Y_RNA.154-201ENST00000363624 102 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 RNY3P1-201ENST00000365085 102 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 RNY3-201ENST00000365484 102 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 Y_RNA.490-201ENST00000384413 102 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 MIR153-1-201ENST00000384914 90 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLRN1P58418 AL356057.2-201ENST00000403318 432 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 AL359643.1-201ENST00000404109 423 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 MTND3P8-201ENST00000412909 339 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.16□□□□□ -1.74
CLRN1P58418 AC114491.1-201ENST00000416095 246 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.16□□□□□ -1.74
CLRN1P58418 UBE2FP1-201ENST00000416536 447 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 AL645937.1-202ENST00000421799 937 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
CLRN1P58418 MRPS18BP2-201ENST00000434310 759 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 PSMD10P3-201ENST00000437000 448 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 AC016831.4-201ENST00000438302 307 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.16□□□□□ -1.74
CLRN1P58418 RPL23AP33-201ENST00000442301 452 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 AL118520.1-201ENST00000450770 291 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 IFNWP4-201ENST00000453148 294 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.16□□□□□ -1.74
CLRN1P58418 AL162395.1-201ENST00000457882 422 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 RPL21P99-201ENST00000480369 423 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN1P58418 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.16□□□□□ -1.74
CLRN1P58418 SCARNA22-201ENST00000503991 125 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.16□□□□□ -1.74
CLRN1P58418 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.16□□□□□ -1.74
CLRN1P58418 RNA5SP503-201ENST00000517047 117 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 AC103783.1-201ENST00000520506 373 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.16□□□□□ -1.74
CLRN1P58418 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN1P58418 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN1P58418 SCOCP1-201ENST00000554676 349 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 RN7SL652P-201ENST00000577769 300 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 AC006254.3-201ENST00000603353 884 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 AC090574.1-201ENST00000623186 233 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.16□□□□□ -1.74
CLRN1P58418 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.16□□□□□ -1.74
CLRN1P58418 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN1P58418 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN1P58418 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CLRN1P58418 EIF2AP4-201ENST00000424793 1781 ntBASIC4.16□□□□□ -1.74
CLRN1P58418 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLRN1P58418 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLRN1P58418 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLRN1P58418 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.15□□□□□ -1.74
CLRN1P58418 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLRN1P58418 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.15□□□□□ -1.74
CLRN1P58418 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLRN1P58418 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLRN1P58418 BDP1P-201ENST00000582658 1990 ntBASIC4.15□□□□□ -1.74
CLRN1P58418 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLRN1P58418 TAB3P1-202ENST00000452645 1634 ntBASIC4.15□□□□□ -1.74
CLRN1P58418 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.15□□□□□ -1.75
CLRN1P58418 AL139276.1-201ENST00000311910 1001 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 RNU6-179P-201ENST00000363350 107 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 SNORA71.2-201ENST00000364941 134 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 RNU4-66P-201ENST00000365199 138 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 RNU6-38P-201ENST00000384085 107 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 Y_RNA.460-201ENST00000384255 102 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 AL109941.1-201ENST00000401925 229 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 AL606923.1-201ENST00000406616 190 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 RNU2-29P-201ENST00000410423 189 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 BX510359.2-201ENST00000417920 305 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 AC093106.2-201ENST00000428212 385 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 CKS1BP5-201ENST00000434172 273 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLRN1P58418 AC007677.1-201ENST00000445757 515 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 RPL29P29-201ENST00000448725 423 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 PPIAP3-201ENST00000450588 505 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLRN1P58418 RNU6-333P-201ENST00000459117 107 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 SNORD97-201ENST00000459187 142 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 AC007547.1-201ENST00000462177 490 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 RPS3AP41-201ENST00000462701 778 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.15□□□□□ -1.75
CLRN1P58418 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLRN1P58418 HMGN1P13-201ENST00000505795 138 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 TTC39CP1-201ENST00000512513 755 ntBASIC4.15□□□□□ -1.75
CLRN1P58418 RNU4-49P-201ENST00000516080 140 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms