Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN6P56747 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN6P56747 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN6P56747 MIR8084-201ENST00000614105 89 ntBASIC2.72□□□□□ -1.97
CLDN6P56747 AC097460.3-201ENST00000623099 442 ntBASIC2.72□□□□□ -1.97
CLDN6P56747 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CLDN6P56747 MAPK10-322ENST00000641485 4530 ntBASIC2.72□□□□□ -1.97
CLDN6P56747 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CLDN6P56747 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN6P56747 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.72□□□□□ -1.97
CLDN6P56747 MTND5P19-201ENST00000424872 1794 ntBASIC2.72□□□□□ -1.97
CLDN6P56747 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
CLDN6P56747 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN6P56747 RNU6-582P-201ENST00000362989 107 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 SNORA51.4-201ENST00000364993 124 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
CLDN6P56747 CD24P4-201ENST00000382840 243 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 SNORD116-23-201ENST00000384645 92 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AL138827.1-201ENST00000402666 306 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN6P56747 FCF1P2-201ENST00000415284 583 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 TAF13P2-201ENST00000416876 286 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AC012498.1-201ENST00000424037 437 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 FAM204CP-201ENST00000424489 642 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN6P56747 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN6P56747 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN6P56747 AL513328.1-201ENST00000446460 224 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AL050341.1-201ENST00000447743 313 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AC091179.1-201ENST00000461606 579 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 RPL7P5-201ENST00000471472 736 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 RPL30P14-201ENST00000482744 348 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN6P56747 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN6P56747 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN6P56747 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN6P56747 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN6P56747 RNA5SP148-201ENST00000516527 94 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN6P56747 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN6P56747 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.71□□□□□ -1.98
CLDN6P56747 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN6P56747 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN6P56747 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN6P56747 AC093519.1-201ENST00000566109 298 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AP002906.1-201ENST00000603405 233 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AC002487.1-201ENST00000604565 994 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AC010738.1-201ENST00000604970 987 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 MIR6817-201ENST00000615588 66 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 MIR6076-201ENST00000617521 113 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AC091046.2-201ENST00000620775 665 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AL353748.2-201ENST00000622148 471 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AC091925.2-201ENST00000625059 256 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AL121594.5-201ENST00000631724 573 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN6P56747 AC108206.1-201ENST00000570186 4159 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 CUL1P1-201ENST00000509510 2425 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 AP003122.5-201ENST00000527668 3766 ntBASIC2.71□□□□□ -1.98
CLDN6P56747 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CLDN6P56747 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CLDN6P56747 AC011460.1-201ENST00000636268 1834 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 RNU6-859P-201ENST00000362728 107 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 RNU6-353P-201ENST00000364266 108 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 SNORA51.6-201ENST00000384151 125 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 RNU6-851P-201ENST00000384565 107 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 RNU6-932P-201ENST00000391108 106 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 RPS4XP3-201ENST00000398541 413 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 AL356057.3-201ENST00000402607 340 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 RPS15AP38-201ENST00000413110 372 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 NDUFB4P5-201ENST00000415445 361 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 BX664727.1-201ENST00000416024 466 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.7□□□□□ -1.98
CLDN6P56747 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.7□□□□□ -1.98
CLDN6P56747 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.7□□□□□ -1.98
CLDN6P56747 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.7□□□□□ -1.98
CLDN6P56747 FDX1P2-201ENST00000450769 375 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.7□□□□□ -1.98
CLDN6P56747 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN6P56747 snoU109.4-201ENST00000458953 143 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 AC084024.2-201ENST00000503480 791 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 AC006390.1-201ENST00000508068 283 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 RNA5SP135-201ENST00000517019 125 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN6P56747 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN6P56747 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.7□□□□□ -1.98
CLDN6P56747 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN6P56747 MED28P6-201ENST00000558776 231 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 AC055876.1-202ENST00000567053 138 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 MIR4789-201ENST00000577469 82 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN6P56747 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLDN6P56747 AC008083.4-201ENST00000615076 444 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.7□□□□□ -1.98
CLDN6P56747 AC009039.2-201ENST00000624524 529 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.7□□□□□ -1.98
CLDN6P56747 AC090740.1-201ENST00000623193 2262 ntBASIC2.7□□□□□ -1.98
CLDN6P56747 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLDN6P56747 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
CLDN6P56747 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms