Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PEX3P56589 FAM133CP-201ENST00000332869 704 ntBASIC3.34□□□□□ -1.87
PEX3P56589 AC073325.2-201ENST00000339545 159 ntBASIC3.34□□□□□ -1.87
PEX3P56589 Y_RNA.311-201ENST00000365068 96 ntBASIC3.34□□□□□ -1.87
PEX3P56589 AC016769.3-201ENST00000396562 315 ntBASIC3.34□□□□□ -1.87
PEX3P56589 AL138885.1-201ENST00000405921 675 ntBASIC3.34□□□□□ -1.87
PEX3P56589 FNDC3CP-201ENST00000420795 1155 ntBASIC3.34□□□□□ -1.87
PEX3P56589 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.34□□□□□ -1.87
PEX3P56589 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.34□□□□□ -1.87
PEX3P56589 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.34□□□□□ -1.87
PEX3P56589 snoU13.3-201ENST00000459441 104 ntBASIC3.34□□□□□ -1.87
PEX3P56589 MTND2P14-201ENST00000482139 351 ntBASIC3.34□□□□□ -1.87
PEX3P56589 AC010587.2-201ENST00000511727 448 ntBASIC3.34□□□□□ -1.87
PEX3P56589 AC006499.2-201ENST00000513470 337 ntBASIC3.34□□□□□ -1.87
PEX3P56589 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.34□□□□□ -1.87
PEX3P56589 AC104986.1-201ENST00000517978 436 ntBASIC3.34□□□□□ -1.87
PEX3P56589 AP002404.1-201ENST00000532005 451 ntBASIC3.34□□□□□ -1.87
PEX3P56589 LRRC34P1-201ENST00000542742 915 ntBASIC3.34□□□□□ -1.87
PEX3P56589 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.34□□□□□ -1.87
PEX3P56589 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.34□□□□□ -1.87
PEX3P56589 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.34□□□□□ -1.87
PEX3P56589 AC245036.5-201ENST00000596330 847 ntBASIC3.34□□□□□ -1.87
PEX3P56589 BNIP3P11-201ENST00000603878 563 ntBASIC3.34□□□□□ -1.87
PEX3P56589 AC021755.4-201ENST00000616620 456 ntBASIC3.34□□□□□ -1.87
PEX3P56589 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.34□□□□□ -1.87
PEX3P56589 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.34□□□□□ -1.87
PEX3P56589 AP000676.4-201ENST00000624659 623 ntBASIC3.34□□□□□ -1.87
PEX3P56589 AC092184.1-201ENST00000625042 715 ntBASIC3.34□□□□□ -1.87
PEX3P56589 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.34□□□□□ -1.87
PEX3P56589 AC116618.1-201ENST00000634617 774 ntBASIC3.34□□□□□ -1.87
PEX3P56589 MIR1322-201ENST00000638013 71 ntBASIC3.34□□□□□ -1.87
PEX3P56589 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.34□□□□□ -1.87
PEX3P56589 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PEX3P56589 ZNF37BP-203ENST00000452306 1352 ntBASIC3.34□□□□□ -1.88
PEX3P56589 ZNF833P-201ENST00000424938 1494 ntBASIC3.34□□□□□ -1.88
PEX3P56589 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.33□□□□□ -1.88
PEX3P56589 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PEX3P56589 MAPK10-362ENST00000641864 4484 ntBASIC3.33□□□□□ -1.88
PEX3P56589 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PEX3P56589 U3.6-201ENST00000363622 211 ntBASIC3.33□□□□□ -1.88
PEX3P56589 RNU6-374P-201ENST00000364146 108 ntBASIC3.33□□□□□ -1.88
PEX3P56589 MIR483-201ENST00000385070 76 ntBASIC3.33□□□□□ -1.88
PEX3P56589 EIF5P1-201ENST00000400019 1231 ntBASIC3.33□□□□□ -1.88
PEX3P56589 RNA5SP56-201ENST00000410277 118 ntBASIC3.33□□□□□ -1.88
PEX3P56589 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.33□□□□□ -1.88
PEX3P56589 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
PEX3P56589 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.33□□□□□ -1.88
PEX3P56589 AL139421.1-201ENST00000423010 169 ntBASIC3.33□□□□□ -1.88
PEX3P56589 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.33□□□□□ -1.88
PEX3P56589 AL035410.1-201ENST00000427409 427 ntBASIC3.33□□□□□ -1.88
PEX3P56589 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.33□□□□□ -1.88
PEX3P56589 CKS1BP5-201ENST00000434172 273 ntBASIC3.33□□□□□ -1.88
PEX3P56589 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.33□□□□□ -1.88
PEX3P56589 VN1R10P-201ENST00000447106 875 ntBASIC3.33□□□□□ -1.88
PEX3P56589 RPL39P6-201ENST00000448289 150 ntBASIC3.33□□□□□ -1.88
PEX3P56589 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.33□□□□□ -1.88
PEX3P56589 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.33□□□□□ -1.88
PEX3P56589 AC092757.1-201ENST00000467293 467 ntBASIC3.33□□□□□ -1.88
PEX3P56589 RPS15AP17-201ENST00000470598 390 ntBASIC3.33□□□□□ -1.88
PEX3P56589 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PEX3P56589 AC117440.1-201ENST00000474107 571 ntBASIC3.33□□□□□ -1.88
PEX3P56589 AC068724.1-201ENST00000487100 792 ntBASIC3.33□□□□□ -1.88
PEX3P56589 OR2A20P-203ENST00000498397 1268 ntBASIC3.33□□□□□ -1.88
PEX3P56589 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PEX3P56589 AP004242.1-201ENST00000533701 349 ntBASIC3.33□□□□□ -1.88
PEX3P56589 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.33□□□□□ -1.88
PEX3P56589 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.33□□□□□ -1.88
PEX3P56589 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.33□□□□□ -1.88
PEX3P56589 AC008127.2-201ENST00000549925 1075 ntBASIC3.33□□□□□ -1.88
PEX3P56589 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.33□□□□□ -1.88
PEX3P56589 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.33□□□□□ -1.88
PEX3P56589 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.33□□□□□ -1.88
PEX3P56589 AC006270.2-201ENST00000578523 652 ntBASIC3.33□□□□□ -1.88
PEX3P56589 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.33□□□□□ -1.88
PEX3P56589 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.33□□□□□ -1.88
PEX3P56589 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.33□□□□□ -1.88
PEX3P56589 AC009220.3-201ENST00000604318 586 ntBASIC3.33□□□□□ -1.88
PEX3P56589 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.33□□□□□ -1.88
PEX3P56589 AC009159.2-201ENST00000617603 606 ntBASIC3.33□□□□□ -1.88
PEX3P56589 AC007318.2-201ENST00000620999 243 ntBASIC3.33□□□□□ -1.88
PEX3P56589 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PEX3P56589 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PEX3P56589 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
PEX3P56589 MTCO1P23-201ENST00000415223 1526 ntBASIC3.33□□□□□ -1.88
PEX3P56589 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PEX3P56589 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.33□□□□□ -1.88
PEX3P56589 MTND5P27-201ENST00000428871 1720 ntBASIC3.33□□□□□ -1.88
PEX3P56589 MTND5P3-201ENST00000438536 1800 ntBASIC3.33□□□□□ -1.88
PEX3P56589 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PEX3P56589 AC093908.1-201ENST00000623125 8092 ntBASIC3.32□□□□□ -1.88
PEX3P56589 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PEX3P56589 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.32□□□□□ -1.88
PEX3P56589 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PEX3P56589 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PEX3P56589 RPL23AP29-201ENST00000397284 453 ntBASIC3.32□□□□□ -1.88
PEX3P56589 AL355379.1-201ENST00000405542 640 ntBASIC3.32□□□□□ -1.88
PEX3P56589 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.32□□□□□ -1.88
PEX3P56589 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.32□□□□□ -1.88
PEX3P56589 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.32□□□□□ -1.88
PEX3P56589 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms