Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH12P55289 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.69□□□□□ -1.82
CDH12P55289 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH12P55289 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH12P55289 NRBF2P1-201ENST00000587407 859 ntBASIC3.69□□□□□ -1.82
CDH12P55289 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH12P55289 IPO5P1-202ENST00000600039 287 ntBASIC3.69□□□□□ -1.82
CDH12P55289 LLPHP1-201ENST00000603571 367 ntBASIC3.69□□□□□ -1.82
CDH12P55289 AL158209.2-201ENST00000619266 216 ntBASIC3.69□□□□□ -1.82
CDH12P55289 AC009268.2-201ENST00000621925 457 ntBASIC3.69□□□□□ -1.82
CDH12P55289 AL157786.1-207ENST00000627771 695 ntBASIC3.69□□□□□ -1.82
CDH12P55289 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH12P55289 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CDH12P55289 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH12P55289 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH12P55289 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CDH12P55289 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CDH12P55289 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH12P55289 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH12P55289 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
CDH12P55289 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH12P55289 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH12P55289 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH12P55289 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH12P55289 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH12P55289 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
CDH12P55289 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CDH12P55289 SNORA60-201ENST00000362396 134 ntBASIC3.68□□□□□ -1.82
CDH12P55289 RNU5E-1-201ENST00000362477 120 ntBASIC3.68□□□□□ -1.82
CDH12P55289 Y_RNA.296-201ENST00000364930 108 ntBASIC3.68□□□□□ -1.82
CDH12P55289 GSTA9P-201ENST00000406231 611 ntBASIC3.68□□□□□ -1.82
CDH12P55289 RPL37P18-201ENST00000411602 243 ntBASIC3.68□□□□□ -1.82
CDH12P55289 MTND1P21-201ENST00000412991 285 ntBASIC3.68□□□□□ -1.82
CDH12P55289 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH12P55289 RPS12P23-201ENST00000419579 400 ntBASIC3.68□□□□□ -1.82
CDH12P55289 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH12P55289 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH12P55289 RPL23AP38-201ENST00000423801 469 ntBASIC3.68□□□□□ -1.82
CDH12P55289 AC019097.1-201ENST00000424783 735 ntBASIC3.68□□□□□ -1.82
CDH12P55289 MTND3P21-201ENST00000433774 331 ntBASIC3.68□□□□□ -1.82
CDH12P55289 ARPC3P1-201ENST00000437218 533 ntBASIC3.68□□□□□ -1.82
CDH12P55289 FABP3P2-201ENST00000453169 399 ntBASIC3.68□□□□□ -1.82
CDH12P55289 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH12P55289 RPL38P1-201ENST00000460914 211 ntBASIC3.68□□□□□ -1.82
CDH12P55289 AC146507.1-201ENST00000468335 354 ntBASIC3.68□□□□□ -1.82
CDH12P55289 AC105137.1-201ENST00000484355 562 ntBASIC3.68□□□□□ -1.82
CDH12P55289 RPS27AP13-201ENST00000498403 237 ntBASIC3.68□□□□□ -1.82
CDH12P55289 AC109927.2-201ENST00000506416 303 ntBASIC3.68□□□□□ -1.82
CDH12P55289 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH12P55289 RNU6-314P-201ENST00000516574 104 ntBASIC3.68□□□□□ -1.82
CDH12P55289 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.68□□□□□ -1.82
CDH12P55289 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH12P55289 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH12P55289 AC009643.1-201ENST00000532030 391 ntBASIC3.68□□□□□ -1.82
CDH12P55289 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH12P55289 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH12P55289 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH12P55289 SETP2-201ENST00000553886 926 ntBASIC3.68□□□□□ -1.82
CDH12P55289 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH12P55289 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH12P55289 MIR4801-201ENST00000582704 82 ntBASIC3.68□□□□□ -1.82
CDH12P55289 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH12P55289 AC121334.2-201ENST00000605387 271 ntBASIC3.68□□□□□ -1.82
CDH12P55289 AC092954.2-201ENST00000609103 430 ntBASIC3.68□□□□□ -1.82
CDH12P55289 MIR8059-201ENST00000620427 81 ntBASIC3.68□□□□□ -1.82
CDH12P55289 AC124864.2-201ENST00000624736 186 ntBASIC3.68□□□□□ -1.82
CDH12P55289 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH12P55289 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH12P55289 AC106871.1-201ENST00000568324 3102 ntBASIC3.68□□□□□ -1.82
CDH12P55289 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
CDH12P55289 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CDH12P55289 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH12P55289 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH12P55289 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH12P55289 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CDH12P55289 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CDH12P55289 RNU6-356P-201ENST00000384140 107 ntBASIC3.67□□□□□ -1.82
CDH12P55289 MIR3074-201ENST00000384885 81 ntBASIC3.67□□□□□ -1.82
CDH12P55289 RNU11-4P-201ENST00000391149 133 ntBASIC3.67□□□□□ -1.82
CDH12P55289 HMGN2P8-201ENST00000391458 268 ntBASIC3.67□□□□□ -1.82
CDH12P55289 RPL23AP32-201ENST00000395315 459 ntBASIC3.67□□□□□ -1.82
CDH12P55289 HSPE1P12-201ENST00000412576 301 ntBASIC3.67□□□□□ -1.82
CDH12P55289 RPL7AP73-201ENST00000413490 353 ntBASIC3.67□□□□□ -1.82
CDH12P55289 MTND3P17-201ENST00000416968 344 ntBASIC3.67□□□□□ -1.82
CDH12P55289 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH12P55289 CYP4F29P-201ENST00000420685 446 ntBASIC3.67□□□□□ -1.82
CDH12P55289 PIGFP2-201ENST00000421400 651 ntBASIC3.67□□□□□ -1.82
CDH12P55289 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH12P55289 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH12P55289 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.67□□□□□ -1.82
CDH12P55289 UBE2V1P13-201ENST00000436983 439 ntBASIC3.67□□□□□ -1.82
CDH12P55289 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH12P55289 UBE2V1P8-201ENST00000437166 265 ntBASIC3.67□□□□□ -1.82
CDH12P55289 FTH1P1-201ENST00000437933 532 ntBASIC3.67□□□□□ -1.82
CDH12P55289 HMGB1P37-201ENST00000439613 609 ntBASIC3.67□□□□□ -1.82
CDH12P55289 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH12P55289 AL645939.1-201ENST00000453429 797 ntBASIC3.67□□□□□ -1.82
CDH12P55289 AL359385.1-201ENST00000456509 365 ntBASIC3.67□□□□□ -1.82
CDH12P55289 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH12P55289 AL139099.1-201ENST00000497398 403 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms