Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL355812.1-201ENST00000603215 216 ntBASIC3.41□□□□□ -1.86
VCPP55072 AL138478.1-201ENST00000612252 832 ntBASIC3.41□□□□□ -1.86
VCPP55072 AL110115.1-201ENST00000614396 364 ntBASIC3.41□□□□□ -1.86
VCPP55072 AC068831.7-201ENST00000616954 363 ntBASIC3.41□□□□□ -1.86
VCPP55072 AC018755.4-201ENST00000619715 454 ntBASIC3.41□□□□□ -1.86
VCPP55072 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.41□□□□□ -1.86
VCPP55072 AP003485.2-201ENST00000623636 610 ntBASIC3.41□□□□□ -1.86
VCPP55072 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
VCPP55072 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
VCPP55072 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VCPP55072 AP005901.5-201ENST00000545779 1796 ntBASIC3.4□□□□□ -1.86
VCPP55072 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
VCPP55072 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.4□□□□□ -1.86
VCPP55072 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
VCPP55072 OR5J1P-201ENST00000313544 939 ntBASIC3.4□□□□□ -1.87
VCPP55072 RNU6-492P-201ENST00000363035 104 ntBASIC3.4□□□□□ -1.87
VCPP55072 U3.11-201ENST00000364476 212 ntBASIC3.4□□□□□ -1.87
VCPP55072 SNORA54-201ENST00000384281 123 ntBASIC3.4□□□□□ -1.87
VCPP55072 SNORD116-12-201ENST00000384468 92 ntBASIC3.4□□□□□ -1.87
VCPP55072 RNU1-101P-201ENST00000391171 127 ntBASIC3.4□□□□□ -1.87
VCPP55072 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.4□□□□□ -1.87
VCPP55072 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.4□□□□□ -1.87
VCPP55072 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VCPP55072 AC106883.1-201ENST00000418805 562 ntBASIC3.4□□□□□ -1.87
VCPP55072 AC006960.1-201ENST00000419980 153 ntBASIC3.4□□□□□ -1.87
VCPP55072 MTCO2P23-201ENST00000425216 680 ntBASIC3.4□□□□□ -1.87
VCPP55072 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.4□□□□□ -1.87
VCPP55072 RPL21P40-201ENST00000428586 483 ntBASIC3.4□□□□□ -1.87
VCPP55072 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.4□□□□□ -1.87
VCPP55072 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.4□□□□□ -1.87
VCPP55072 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.4□□□□□ -1.87
VCPP55072 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.4□□□□□ -1.87
VCPP55072 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
VCPP55072 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
VCPP55072 AC104073.1-201ENST00000451988 151 ntBASIC3.4□□□□□ -1.87
VCPP55072 AC091179.1-201ENST00000461606 579 ntBASIC3.4□□□□□ -1.87
VCPP55072 RN7SL863P-201ENST00000462370 296 ntBASIC3.4□□□□□ -1.87
VCPP55072 AC084024.2-201ENST00000503480 791 ntBASIC3.4□□□□□ -1.87
VCPP55072 AC114967.1-201ENST00000504890 259 ntBASIC3.4□□□□□ -1.87
VCPP55072 TPT1P8-201ENST00000510120 555 ntBASIC3.4□□□□□ -1.87
VCPP55072 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VCPP55072 OR10V3P-201ENST00000525712 725 ntBASIC3.4□□□□□ -1.87
VCPP55072 LSM6P2-201ENST00000552208 177 ntBASIC3.4□□□□□ -1.87
VCPP55072 GTF3AP2-201ENST00000557014 266 ntBASIC3.4□□□□□ -1.87
VCPP55072 MTCO3P24-201ENST00000572729 782 ntBASIC3.4□□□□□ -1.87
VCPP55072 MIR3912-201ENST00000577566 105 ntBASIC3.4□□□□□ -1.87
VCPP55072 NRBF2P5-201ENST00000603087 788 ntBASIC3.4□□□□□ -1.87
VCPP55072 RPL23AP92-201ENST00000603609 255 ntBASIC3.4□□□□□ -1.87
VCPP55072 AL160237.3-201ENST00000604114 1013 ntBASIC3.4□□□□□ -1.87
VCPP55072 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.4□□□□□ -1.87
VCPP55072 OR4G3P-201ENST00000633500 913 ntBASIC3.4□□□□□ -1.87
VCPP55072 AC026634.1-201ENST00000634369 198 ntBASIC3.4□□□□□ -1.87
VCPP55072 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.4□□□□□ -1.87
VCPP55072 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.4□□□□□ -1.87
VCPP55072 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
VCPP55072 Z99496.1-201ENST00000469424 1477 ntBASIC3.4□□□□□ -1.87
VCPP55072 AC106754.1-201ENST00000562632 1513 ntBASIC3.39□□□□□ -1.87
VCPP55072 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VCPP55072 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VCPP55072 AL359693.1-201ENST00000614959 2407 ntBASIC3.39□□□□□ -1.87
VCPP55072 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.39□□□□□ -1.87
VCPP55072 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
VCPP55072 MIR148B-201ENST00000362252 99 ntBASIC3.39□□□□□ -1.87
VCPP55072 snoZ40.1-201ENST00000364540 72 ntBASIC3.39□□□□□ -1.87
VCPP55072 Y_RNA.472-201ENST00000384322 102 ntBASIC3.39□□□□□ -1.87
VCPP55072 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
VCPP55072 MTCO2P8-201ENST00000412213 658 ntBASIC3.39□□□□□ -1.87
VCPP55072 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.39□□□□□ -1.87
VCPP55072 AC092634.6-201ENST00000418558 192 ntBASIC3.39□□□□□ -1.87
VCPP55072 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.39□□□□□ -1.87
VCPP55072 OR10R1P-201ENST00000441524 1141 ntBASIC3.39□□□□□ -1.87
VCPP55072 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.39□□□□□ -1.87
VCPP55072 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.39□□□□□ -1.87
VCPP55072 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.39□□□□□ -1.87
VCPP55072 RPS23P3-201ENST00000470993 430 ntBASIC3.39□□□□□ -1.87
VCPP55072 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.39□□□□□ -1.87
VCPP55072 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.39□□□□□ -1.87
VCPP55072 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.39□□□□□ -1.87
VCPP55072 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.39□□□□□ -1.87
VCPP55072 AC091826.1-201ENST00000514065 313 ntBASIC3.39□□□□□ -1.87
VCPP55072 SNORA48.10-201ENST00000516965 160 ntBASIC3.39□□□□□ -1.87
VCPP55072 HIGD1AP1-201ENST00000550979 275 ntBASIC3.39□□□□□ -1.87
VCPP55072 MTCYBP27-201ENST00000555160 670 ntBASIC3.39□□□□□ -1.87
VCPP55072 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.39□□□□□ -1.87
VCPP55072 MTND3P13-201ENST00000574391 343 ntBASIC3.39□□□□□ -1.87
VCPP55072 AP001029.3-201ENST00000588063 596 ntBASIC3.39□□□□□ -1.87
VCPP55072 AC107294.3-201ENST00000609211 526 ntBASIC3.39□□□□□ -1.87
VCPP55072 AL157392.4-201ENST00000609756 345 ntBASIC3.39□□□□□ -1.87
VCPP55072 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
VCPP55072 AL158163.2-201ENST00000619110 700 ntBASIC3.39□□□□□ -1.87
VCPP55072 AL121895.2-201ENST00000619558 447 ntBASIC3.39□□□□□ -1.87
VCPP55072 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.39□□□□□ -1.87
VCPP55072 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.39□□□□□ -1.87
VCPP55072 MTND2P41-201ENST00000637599 773 ntBASIC3.39□□□□□ -1.87
VCPP55072 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
VCPP55072 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.39□□□□□ -1.87
VCPP55072 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VCPP55072 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.38□□□□□ -1.87
VCPP55072 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VCPP55072 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms