Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA4P54764 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
EPHA4P54764 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA4P54764 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA4P54764 RNU6-263P-201ENST00000363811 107 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 RNU6-371P-201ENST00000364283 108 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
EPHA4P54764 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA4P54764 Y_RNA.483-201ENST00000384380 101 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 SNORA51.11-201ENST00000384442 131 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 RNU6-14P-201ENST00000384630 106 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 MT-TW-201ENST00000387382 68 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 RPL21P67-201ENST00000402896 478 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 RNU4-78P-201ENST00000410940 126 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 AL030996.1-201ENST00000411430 235 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 MTCO3P19-201ENST00000415864 321 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHA4P54764 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.48□□□□□ -1.53
EPHA4P54764 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.48□□□□□ -1.53
EPHA4P54764 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHA4P54764 AL450023.1-201ENST00000450868 751 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 RPS15AP34-201ENST00000487776 387 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 RN7SL629P-201ENST00000489622 285 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHA4P54764 MRPS33P2-201ENST00000507850 322 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHA4P54764 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
EPHA4P54764 Y_RNA.680-201ENST00000516441 93 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.48□□□□□ -1.53
EPHA4P54764 MRPS21P7-201ENST00000566937 238 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 MIR548AC-201ENST00000585049 88 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 AL512605.2-201ENST00000592972 256 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHA4P54764 SUMO2P15-201ENST00000604285 278 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 SNORD91B-202ENST00000608459 222 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 AC096772.1-201ENST00000609146 564 ntBASIC5.48□□□□□ -1.53
EPHA4P54764 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA4P54764 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA4P54764 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA4P54764 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
EPHA4P54764 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA4P54764 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA4P54764 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA4P54764 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA4P54764 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA4P54764 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
EPHA4P54764 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
EPHA4P54764 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
EPHA4P54764 RN7SKP162-201ENST00000363605 345 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 RNU1-146P-201ENST00000364015 165 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 Y_RNA.222-201ENST00000364264 102 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 Y_RNA.376-201ENST00000365638 108 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 RNU6-178P-201ENST00000384631 104 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 MIR628-201ENST00000385229 95 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
EPHA4P54764 RPL11P3-201ENST00000395256 523 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 AL133388.1-201ENST00000404509 287 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.47□□□□□ -1.53
EPHA4P54764 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.47□□□□□ -1.53
EPHA4P54764 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 CRIP1P1-201ENST00000427567 185 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 RPL12P46-201ENST00000436610 195 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 RPS3AP46-201ENST00000448352 682 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 AC100832.1-201ENST00000471945 383 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 AC007686.1-201ENST00000488511 463 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 GMPSP1-201ENST00000514075 579 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 Y_RNA.687-201ENST00000516558 91 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 AC087369.1-201ENST00000520775 996 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHA4P54764 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.47□□□□□ -1.53
EPHA4P54764 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
EPHA4P54764 RN7SL652P-201ENST00000577769 300 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 MIR4489-201ENST00000578869 62 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 MIR4311-201ENST00000580794 100 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.47□□□□□ -1.53
EPHA4P54764 HMGB2P1-201ENST00000591146 634 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 BDH2P1-201ENST00000602288 736 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 AC068790.4-201ENST00000602474 263 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 AL390123.1-201ENST00000603216 237 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 HMGB1P50-201ENST00000605814 607 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 MIR8080-201ENST00000622224 89 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHA4P54764 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 AL161756.3-201ENST00000641216 2071 ntBASIC5.47□□□□□ -1.53
EPHA4P54764 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.47□□□□□ -1.53
EPHA4P54764 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
EPHA4P54764 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA4P54764 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms