Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.63□□□□□ -1.83
LIMK1P53667 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMK1P53667 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMK1P53667 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMK1P53667 AC140725.3-201ENST00000616193 880 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 AC009159.2-201ENST00000617603 606 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.63□□□□□ -1.83
LIMK1P53667 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.63□□□□□ -1.83
LIMK1P53667 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
LIMK1P53667 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LIMK1P53667 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LIMK1P53667 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LIMK1P53667 AC103988.1-201ENST00000566382 2177 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 ZNF807-201ENST00000328088 1707 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 RNU6-1214P-201ENST00000363650 109 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LIMK1P53667 RNU6-1074P-201ENST00000383995 104 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 RNU6-1077P-201ENST00000410506 102 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 RNU2-47P-201ENST00000410649 186 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LIMK1P53667 TPMTP2-201ENST00000414372 726 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LIMK1P53667 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.62□□□□□ -1.83
LIMK1P53667 MTCYBP38-201ENST00000417160 1123 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.62□□□□□ -1.83
LIMK1P53667 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.62□□□□□ -1.83
LIMK1P53667 RPL21P40-201ENST00000428586 483 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 ZYG11AP1-201ENST00000430329 837 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 SDCBPP1-201ENST00000440192 890 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.62□□□□□ -1.83
LIMK1P53667 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.62□□□□□ -1.83
LIMK1P53667 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.62□□□□□ -1.83
LIMK1P53667 AL445669.2-201ENST00000454425 421 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 MTCO3P16-201ENST00000454456 754 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AC104308.1-201ENST00000454621 333 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
LIMK1P53667 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AC020893.1-201ENST00000502452 580 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.62□□□□□ -1.83
LIMK1P53667 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.62□□□□□ -1.83
LIMK1P53667 MLLT10P2-201ENST00000506434 249 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 SNORA31.8-201ENST00000516327 108 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.62□□□□□ -1.83
LIMK1P53667 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LIMK1P53667 AC023538.1-201ENST00000534576 736 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.62□□□□□ -1.83
LIMK1P53667 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.62□□□□□ -1.83
LIMK1P53667 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.62□□□□□ -1.83
LIMK1P53667 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.62□□□□□ -1.83
LIMK1P53667 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.62□□□□□ -1.83
LIMK1P53667 LARP7P3-201ENST00000579888 337 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AC006116.10-201ENST00000591836 581 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AC012669.1-201ENST00000603209 283 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AL031176.1-201ENST00000604554 466 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AC008962.1-201ENST00000605729 304 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AL136981.2-201ENST00000617319 734 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AC002076.2-201ENST00000617362 122 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AL607023.1-201ENST00000620045 248 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AC007490.1-201ENST00000624321 703 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 AC103706.2-201ENST00000638080 240 ntBASIC3.62□□□□□ -1.83
LIMK1P53667 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LIMK1P53667 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LIMK1P53667 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LIMK1P53667 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.61□□□□□ -1.83
LIMK1P53667 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LIMK1P53667 AL049780.3-201ENST00000624612 1583 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
LIMK1P53667 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.61□□□□□ -1.83
LIMK1P53667 TAS2R15P-201ENST00000390674 928 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 RNU6-952P-201ENST00000391164 108 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.61□□□□□ -1.83
LIMK1P53667 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.61□□□□□ -1.83
LIMK1P53667 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.61□□□□□ -1.83
LIMK1P53667 AC007742.1-201ENST00000425789 329 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.61□□□□□ -1.83
LIMK1P53667 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.61□□□□□ -1.83
LIMK1P53667 ELOCP26-201ENST00000436067 329 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 SNRPEP7-201ENST00000438350 220 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 AL354941.1-201ENST00000438600 464 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.61□□□□□ -1.83
LIMK1P53667 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.61□□□□□ -1.83
LIMK1P53667 HMGB3P8-201ENST00000449709 577 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.61□□□□□ -1.83
LIMK1P53667 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.61□□□□□ -1.83
LIMK1P53667 BX322784.1-201ENST00000455793 1077 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.61□□□□□ -1.83
LIMK1P53667 AC104685.1-201ENST00000502445 371 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 AC021146.5-201ENST00000503544 545 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.61□□□□□ -1.83
LIMK1P53667 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.61□□□□□ -1.83
LIMK1P53667 AC112673.1-201ENST00000513168 575 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 AC105185.1-201ENST00000518705 535 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 ERHP1-201ENST00000523006 310 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.61□□□□□ -1.83
LIMK1P53667 AC022690.1-201ENST00000526681 550 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 AP003461.1-201ENST00000528866 78 ntBASIC3.61□□□□□ -1.83
LIMK1P53667 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.61□□□□□ -1.83
LIMK1P53667 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.61□□□□□ -1.83
LIMK1P53667 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LIMK1P53667 AL121576.1-201ENST00000556055 276 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms