Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AL034351.1-201ENST00000605288 668 ntBASIC3.71□□□□□ -1.82
CLCNKAP51800 AC087752.4-201ENST00000605911 462 ntBASIC3.71□□□□□ -1.82
CLCNKAP51800 SNORA62.6-201ENST00000606322 83 ntBASIC3.71□□□□□ -1.82
CLCNKAP51800 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.71□□□□□ -1.82
CLCNKAP51800 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.71□□□□□ -1.82
CLCNKAP51800 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.71□□□□□ -1.82
CLCNKAP51800 AC122108.2-201ENST00000611946 526 ntBASIC3.71□□□□□ -1.82
CLCNKAP51800 AL121772.2-201ENST00000614331 297 ntBASIC3.71□□□□□ -1.82
CLCNKAP51800 AC009509.4-201ENST00000619202 509 ntBASIC3.71□□□□□ -1.82
CLCNKAP51800 AC093591.3-201ENST00000634516 308 ntBASIC3.71□□□□□ -1.82
CLCNKAP51800 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLCNKAP51800 AC006378.2-201ENST00000623178 2476 ntBASIC3.71□□□□□ -1.82
CLCNKAP51800 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.71□□□□□ -1.82
CLCNKAP51800 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLCNKAP51800 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CLCNKAP51800 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLCNKAP51800 RPS4XP5-202ENST00000449995 1334 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CLCNKAP51800 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CLCNKAP51800 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLCNKAP51800 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCNKAP51800 RNU6-335P-201ENST00000364563 113 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 RNU6-744P-201ENST00000365557 107 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 RNU6-1316P-201ENST00000384242 108 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 RNU6-769P-201ENST00000384407 104 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 Y_RNA.493-201ENST00000384422 102 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 RNU6-809P-201ENST00000384461 107 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCNKAP51800 DEFB108C-201ENST00000400154 252 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 MTND4LP20-201ENST00000402379 270 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.7□□□□□ -1.82
CLCNKAP51800 RNU2-71P-201ENST00000411395 189 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 RAB9AP3-201ENST00000412737 573 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 RPL17P12-201ENST00000413391 526 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.7□□□□□ -1.82
CLCNKAP51800 AC127526.1-201ENST00000417526 366 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCNKAP51800 OFD1P18Y-201ENST00000420889 959 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 MTCO2P5-201ENST00000422621 426 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 AC007742.1-201ENST00000425789 329 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.7□□□□□ -1.82
CLCNKAP51800 ELOCP26-201ENST00000436067 329 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 SNORA71B-202ENST00000439232 272 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.7□□□□□ -1.82
CLCNKAP51800 RAB9AP1-201ENST00000449393 573 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.7□□□□□ -1.82
CLCNKAP51800 DNAJC19P1-201ENST00000455312 319 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 CFTRP1-201ENST00000456646 183 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 UBDP1-202ENST00000457888 382 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 RNA5SP269-201ENST00000459032 137 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 ACTR3P3-201ENST00000480448 893 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 RPS4XP13-201ENST00000483219 789 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 AC023424.2-201ENST00000493479 777 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 NIPA2P2-201ENST00000496376 1083 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CLCNKAP51800 AC022447.3-201ENST00000506865 495 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CLCNKAP51800 RAC1P2-201ENST00000511164 579 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 RNA5SP208-201ENST00000516156 78 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.7□□□□□ -1.82
CLCNKAP51800 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.7□□□□□ -1.82
CLCNKAP51800 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLCNKAP51800 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.7□□□□□ -1.82
CLCNKAP51800 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCNKAP51800 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.7□□□□□ -1.82
CLCNKAP51800 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.7□□□□□ -1.82
CLCNKAP51800 AC053481.3-201ENST00000577881 843 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCNKAP51800 AC112187.2-201ENST00000604345 283 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 HMGN2P28-201ENST00000606102 262 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 AL139286.2-201ENST00000606838 396 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 AC006133.1-201ENST00000617106 264 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 U7.8-201ENST00000619968 63 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCNKAP51800 CR392039.5-201ENST00000623201 510 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.7□□□□□ -1.82
CLCNKAP51800 AC012442.3-202ENST00000636742 206 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCNKAP51800 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCNKAP51800 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CLCNKAP51800 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.7□□□□□ -1.82
CLCNKAP51800 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCNKAP51800 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCNKAP51800 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CLCNKAP51800 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CLCNKAP51800 BDP1P-201ENST00000582658 1990 ntBASIC3.69□□□□□ -1.82
CLCNKAP51800 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLCNKAP51800 RNU6-28P-201ENST00000362378 107 ntBASIC3.69□□□□□ -1.82
CLCNKAP51800 SNORA75-201ENST00000384158 137 ntBASIC3.69□□□□□ -1.82
CLCNKAP51800 MT-TC-201ENST00000387405 66 ntBASIC3.69□□□□□ -1.82
CLCNKAP51800 U3.29-201ENST00000391296 212 ntBASIC3.69□□□□□ -1.82
CLCNKAP51800 SNORA48.7-201ENST00000391302 135 ntBASIC3.69□□□□□ -1.82
CLCNKAP51800 MIR1305-201ENST00000408300 86 ntBASIC3.69□□□□□ -1.82
CLCNKAP51800 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLCNKAP51800 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.69□□□□□ -1.82
CLCNKAP51800 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.69□□□□□ -1.82
CLCNKAP51800 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.69□□□□□ -1.82
CLCNKAP51800 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms