Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CCDC58P2-201ENST00000417131 366 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AL137014.1-201ENST00000420490 1226 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AL139413.1-201ENST00000421309 217 ntBASIC3.75□□□□□ -1.81
SOX2P48431 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOX2P48431 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.75□□□□□ -1.81
SOX2P48431 AC016712.1-201ENST00000431088 378 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX2P48431 RPL7P54-201ENST00000438336 674 ntBASIC3.75□□□□□ -1.81
SOX2P48431 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.75□□□□□ -1.81
SOX2P48431 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX2P48431 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.75□□□□□ -1.81
SOX2P48431 DPPA3P1-201ENST00000448050 469 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX2P48431 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX2P48431 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX2P48431 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX2P48431 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX2P48431 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.75□□□□□ -1.81
SOX2P48431 AC004453.1-201ENST00000487895 408 ntBASIC3.75□□□□□ -1.81
SOX2P48431 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.75□□□□□ -1.81
SOX2P48431 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX2P48431 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.75□□□□□ -1.81
SOX2P48431 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX2P48431 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX2P48431 NRON-201ENST00000517270 370 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX2P48431 AC104383.1-201ENST00000530297 370 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX2P48431 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.75□□□□□ -1.81
SOX2P48431 AC007424.1-203ENST00000554613 687 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AL121579.1-201ENST00000555129 305 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AL133153.1-201ENST00000557756 303 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AC098848.2-201ENST00000588023 330 ntBASIC3.75□□□□□ -1.81
SOX2P48431 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SOX2P48431 AP001429.1-201ENST00000602568 530 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AC025449.1-201ENST00000603896 529 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AL357078.3-201ENST00000607528 618 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.75□□□□□ -1.81
SOX2P48431 AC090510.2-201ENST00000617465 629 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AC007546.1-201ENST00000619452 559 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AC005609.4-201ENST00000625071 447 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AC019226.1-201ENST00000625666 515 ntBASIC3.75□□□□□ -1.81
SOX2P48431 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.75□□□□□ -1.81
SOX2P48431 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SOX2P48431 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SOX2P48431 AC244517.1-201ENST00000606030 2086 ntBASIC3.75□□□□□ -1.81
SOX2P48431 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOX2P48431 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOX2P48431 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
SOX2P48431 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.75□□□□□ -1.81
SOX2P48431 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.74□□□□□ -1.81
SOX2P48431 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
SOX2P48431 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SOX2P48431 Z82217.1-201ENST00000625157 8149 ntBASIC3.74□□□□□ -1.81
SOX2P48431 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SOX2P48431 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SOX2P48431 SNORD56.2-201ENST00000363242 71 ntBASIC3.74□□□□□ -1.81
SOX2P48431 RNA5SP175-201ENST00000364275 119 ntBASIC3.74□□□□□ -1.81
SOX2P48431 RNU6-637P-201ENST00000384050 107 ntBASIC3.74□□□□□ -1.81
SOX2P48431 MIR3065-201ENST00000390137 79 ntBASIC3.74□□□□□ -1.81
SOX2P48431 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SOX2P48431 SPTLC1P2-201ENST00000407089 121 ntBASIC3.74□□□□□ -1.81
SOX2P48431 RNA5SP306-201ENST00000411087 107 ntBASIC3.74□□□□□ -1.81
SOX2P48431 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.74□□□□□ -1.81
SOX2P48431 MRPL50P2-201ENST00000416821 482 ntBASIC3.74□□□□□ -1.81
SOX2P48431 AL807761.1-201ENST00000417622 171 ntBASIC3.74□□□□□ -1.81
SOX2P48431 RPL30P16-201ENST00000419341 429 ntBASIC3.74□□□□□ -1.81
SOX2P48431 BEND7P1-201ENST00000422058 457 ntBASIC3.74□□□□□ -1.81
SOX2P48431 RPL7AP25-201ENST00000423357 805 ntBASIC3.74□□□□□ -1.81
SOX2P48431 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.74□□□□□ -1.81
SOX2P48431 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.74□□□□□ -1.81
SOX2P48431 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.74□□□□□ -1.81
SOX2P48431 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.74□□□□□ -1.81
SOX2P48431 RPL23AP30-201ENST00000432419 501 ntBASIC3.74□□□□□ -1.81
SOX2P48431 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.74□□□□□ -1.81
SOX2P48431 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.74□□□□□ -1.81
SOX2P48431 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.74□□□□□ -1.81
SOX2P48431 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.74□□□□□ -1.81
SOX2P48431 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.74□□□□□ -1.81
SOX2P48431 RAD23BP3-201ENST00000454157 1152 ntBASIC3.74□□□□□ -1.81
SOX2P48431 RPS3AP41-201ENST00000462701 778 ntBASIC3.74□□□□□ -1.81
SOX2P48431 AC006517.1-201ENST00000480485 328 ntBASIC3.74□□□□□ -1.81
SOX2P48431 RPL36AP51-201ENST00000487216 318 ntBASIC3.74□□□□□ -1.81
SOX2P48431 AC069439.1-201ENST00000494739 167 ntBASIC3.74□□□□□ -1.81
SOX2P48431 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SOX2P48431 AC139783.2-201ENST00000504847 1145 ntBASIC3.74□□□□□ -1.81
SOX2P48431 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.74□□□□□ -1.81
SOX2P48431 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.74□□□□□ -1.81
SOX2P48431 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.74□□□□□ -1.81
SOX2P48431 SCARNA24.1-201ENST00000516465 137 ntBASIC3.74□□□□□ -1.81
SOX2P48431 RNU4-60P-201ENST00000517239 135 ntBASIC3.74□□□□□ -1.81
SOX2P48431 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.74□□□□□ -1.81
SOX2P48431 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.74□□□□□ -1.81
SOX2P48431 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.74□□□□□ -1.81
SOX2P48431 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.74□□□□□ -1.81
SOX2P48431 AC090281.1-201ENST00000523019 276 ntBASIC3.74□□□□□ -1.81
SOX2P48431 OR4R1P-201ENST00000529879 463 ntBASIC3.74□□□□□ -1.81
SOX2P48431 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.74□□□□□ -1.81
SOX2P48431 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.74□□□□□ -1.81
SOX2P48431 RPL21P12-201ENST00000559810 515 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms