Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AL512649.1-201ENST00000428997 581 ntBASIC2.8□□□□□ -1.96
RFX3P48380 SETP8-201ENST00000435341 628 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AL590664.1-201ENST00000448065 339 ntBASIC2.8□□□□□ -1.96
RFX3P48380 HMGN1P5-201ENST00000448591 263 ntBASIC2.8□□□□□ -1.96
RFX3P48380 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.8□□□□□ -1.96
RFX3P48380 AL031183.1-201ENST00000457667 207 ntBASIC2.8□□□□□ -1.96
RFX3P48380 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RFX3P48380 PRELID3BP6-201ENST00000503839 571 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AC008885.1-201ENST00000514930 301 ntBASIC2.8□□□□□ -1.96
RFX3P48380 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RFX3P48380 RN7SKP57-201ENST00000517248 293 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AC027309.2-201ENST00000520566 192 ntBASIC2.8□□□□□ -1.96
RFX3P48380 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RFX3P48380 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.8□□□□□ -1.96
RFX3P48380 NDUFS5P6-201ENST00000529136 295 ntBASIC2.8□□□□□ -1.96
RFX3P48380 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RFX3P48380 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.8□□□□□ -1.96
RFX3P48380 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.8□□□□□ -1.96
RFX3P48380 MIR5004-201ENST00000579078 107 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.8□□□□□ -1.96
RFX3P48380 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.8□□□□□ -1.96
RFX3P48380 YPEL5P2-201ENST00000605553 359 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AC012443.1-201ENST00000605605 231 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AL583856.2-201ENST00000606298 543 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.8□□□□□ -1.96
RFX3P48380 AP001521.1-201ENST00000609150 300 ntBASIC2.8□□□□□ -1.96
RFX3P48380 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.8□□□□□ -1.96
RFX3P48380 RNU6-1192P-201ENST00000612197 107 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AL162274.2-201ENST00000614406 332 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AC231759.1-201ENST00000616455 597 ntBASIC2.8□□□□□ -1.96
RFX3P48380 RNU6-489P-201ENST00000618289 107 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AL512427.1-201ENST00000618593 349 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.8□□□□□ -1.96
RFX3P48380 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.8□□□□□ -1.96
RFX3P48380 AC073348.1-201ENST00000623002 331 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AL356585.4-201ENST00000623078 1229 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AP003485.1-201ENST00000625093 753 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AP001002.2-201ENST00000625137 386 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AC126544.2-201ENST00000625174 749 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AL365361.1-201ENST00000566942 3481 ntBASIC2.8□□□□□ -1.96
RFX3P48380 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.79□□□□□ -1.96
RFX3P48380 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.79□□□□□ -1.96
RFX3P48380 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.79□□□□□ -1.96
RFX3P48380 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RFX3P48380 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX3P48380 RNU6-1300P-201ENST00000391046 108 ntBASIC2.79□□□□□ -1.96
RFX3P48380 MTCO1P56-201ENST00000401674 224 ntBASIC2.79□□□□□ -1.96
RFX3P48380 AL603865.2-201ENST00000401679 213 ntBASIC2.79□□□□□ -1.96
RFX3P48380 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RFX3P48380 NDUFB4P4-201ENST00000404822 243 ntBASIC2.79□□□□□ -1.96
RFX3P48380 Z92545.1-201ENST00000411782 234 ntBASIC2.79□□□□□ -1.96
RFX3P48380 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.79□□□□□ -1.96
RFX3P48380 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.79□□□□□ -1.96
RFX3P48380 USP9YP21-201ENST00000420603 432 ntBASIC2.79□□□□□ -1.96
RFX3P48380 DPRXP1-201ENST00000426312 460 ntBASIC2.79□□□□□ -1.96
RFX3P48380 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.79□□□□□ -1.96
RFX3P48380 CYCSP32-201ENST00000440548 321 ntBASIC2.79□□□□□ -1.96
RFX3P48380 MTCYBP42-201ENST00000444653 1130 ntBASIC2.79□□□□□ -1.96
RFX3P48380 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX3P48380 VN1R10P-201ENST00000447106 875 ntBASIC2.79□□□□□ -1.96
RFX3P48380 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.79□□□□□ -1.96
RFX3P48380 RFC5P1-201ENST00000454419 874 ntBASIC2.79□□□□□ -1.96
RFX3P48380 RPL30P14-201ENST00000482744 348 ntBASIC2.79□□□□□ -1.96
RFX3P48380 RN7SL633P-201ENST00000488974 297 ntBASIC2.79□□□□□ -1.96
RFX3P48380 RNU6-1028P-201ENST00000517164 93 ntBASIC2.79□□□□□ -1.96
RFX3P48380 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX3P48380 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.79□□□□□ -1.96
RFX3P48380 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
RFX3P48380 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX3P48380 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.79□□□□□ -1.96
RFX3P48380 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.79□□□□□ -1.96
RFX3P48380 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX3P48380 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.79□□□□□ -1.96
RFX3P48380 AC012119.1-201ENST00000603184 222 ntBASIC2.79□□□□□ -1.96
RFX3P48380 AC092574.1-201ENST00000609771 420 ntBASIC2.79□□□□□ -1.96
RFX3P48380 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.79□□□□□ -1.96
RFX3P48380 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
RFX3P48380 AC007318.2-201ENST00000620999 243 ntBASIC2.79□□□□□ -1.96
RFX3P48380 AP002371.2-201ENST00000624450 503 ntBASIC2.79□□□□□ -1.96
RFX3P48380 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.79□□□□□ -1.96
RFX3P48380 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.79□□□□□ -1.96
RFX3P48380 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RFX3P48380 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.79□□□□□ -1.96
RFX3P48380 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.79□□□□□ -1.96
RFX3P48380 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
RFX3P48380 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
RFX3P48380 MIR422A-201ENST00000362286 90 ntBASIC2.78□□□□□ -1.96
RFX3P48380 RNU6-173P-201ENST00000364215 104 ntBASIC2.78□□□□□ -1.96
RFX3P48380 RNU6-878P-201ENST00000384578 110 ntBASIC2.78□□□□□ -1.96
RFX3P48380 MIR634-201ENST00000385208 97 ntBASIC2.78□□□□□ -1.96
RFX3P48380 RNU6-882P-201ENST00000391025 103 ntBASIC2.78□□□□□ -1.96
RFX3P48380 AL079342.2-201ENST00000403367 482 ntBASIC2.78□□□□□ -1.96
RFX3P48380 AL031121.1-201ENST00000406553 254 ntBASIC2.78□□□□□ -1.96
RFX3P48380 RPL5P18-201ENST00000406671 891 ntBASIC2.78□□□□□ -1.96
RFX3P48380 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.78□□□□□ -1.96
RFX3P48380 AC096664.2-201ENST00000411843 406 ntBASIC2.78□□□□□ -1.96
RFX3P48380 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.78□□□□□ -1.96
RFX3P48380 LUZP4P1-201ENST00000415420 344 ntBASIC2.78□□□□□ -1.96
RFX3P48380 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.78□□□□□ -1.96
RFX3P48380 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms