Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM4SF4P48230 OR4K11P-201ENST00000431829 904 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 AC005019.1-201ENST00000436455 431 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 RPL35AP22-201ENST00000436855 335 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.36□□□□□ -1.71
TM4SF4P48230 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.36□□□□□ -1.71
TM4SF4P48230 RPS24P6-201ENST00000452670 400 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 snoU109.1-201ENST00000459339 135 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.36□□□□□ -1.71
TM4SF4P48230 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.36□□□□□ -1.71
TM4SF4P48230 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.36□□□□□ -1.71
TM4SF4P48230 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.36□□□□□ -1.71
TM4SF4P48230 KLHL2P1-201ENST00000508691 521 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 AC021146.1-201ENST00000511202 716 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.36□□□□□ -1.71
TM4SF4P48230 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.36□□□□□ -1.71
TM4SF4P48230 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.36□□□□□ -1.71
TM4SF4P48230 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
TM4SF4P48230 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.36□□□□□ -1.71
TM4SF4P48230 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.36□□□□□ -1.71
TM4SF4P48230 AC024909.2-201ENST00000553035 286 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 MIR5697-201ENST00000578045 78 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 AC006270.2-201ENST00000578523 652 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.36□□□□□ -1.71
TM4SF4P48230 AC112191.3-201ENST00000604371 277 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.36□□□□□ -1.71
TM4SF4P48230 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 AL159972.1-201ENST00000625150 448 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TM4SF4P48230 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TM4SF4P48230 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
TM4SF4P48230 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM4SF4P48230 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TM4SF4P48230 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
TM4SF4P48230 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TM4SF4P48230 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM4SF4P48230 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TM4SF4P48230 AL133383.2-201ENST00000622958 2336 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TM4SF4P48230 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TM4SF4P48230 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TM4SF4P48230 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.35□□□□□ -1.71
TM4SF4P48230 AC007685.1-201ENST00000329806 452 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 SNORD9-201ENST00000362566 104 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 Y_RNA.51-201ENST00000362725 102 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.35□□□□□ -1.71
TM4SF4P48230 RNU6-516P-201ENST00000411381 104 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TM4SF4P48230 BTF3L4P1-201ENST00000413813 468 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 RPS23P10-201ENST00000416185 486 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TM4SF4P48230 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.35□□□□□ -1.71
TM4SF4P48230 HMGB1P37-201ENST00000439613 609 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.35□□□□□ -1.71
TM4SF4P48230 MTCO2P7-201ENST00000446518 666 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 ST13P20-201ENST00000447996 1065 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.35□□□□□ -1.71
TM4SF4P48230 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.35□□□□□ -1.71
TM4SF4P48230 SSXP1-201ENST00000453640 473 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 VN1R104P-201ENST00000505115 1009 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TM4SF4P48230 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TM4SF4P48230 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.35□□□□□ -1.71
TM4SF4P48230 RNU6-798P-201ENST00000516912 103 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.35□□□□□ -1.71
TM4SF4P48230 RPL12P22-201ENST00000519073 490 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 RANP9-201ENST00000519957 271 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.35□□□□□ -1.71
TM4SF4P48230 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.35□□□□□ -1.71
TM4SF4P48230 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.35□□□□□ -1.71
TM4SF4P48230 AC087481.2-201ENST00000565492 330 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 AC007599.1-201ENST00000568688 1174 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 AC068790.5-201ENST00000602741 355 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 AC104662.1-201ENST00000604448 511 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.35□□□□□ -1.71
TM4SF4P48230 AC004908.2-201ENST00000609090 574 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.35□□□□□ -1.71
TM4SF4P48230 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.35□□□□□ -1.71
TM4SF4P48230 AC011939.3-201ENST00000613686 466 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 AC008250.2-201ENST00000615261 205 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 MIR6130-201ENST00000619419 109 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.35□□□□□ -1.71
TM4SF4P48230 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.35□□□□□ -1.71
TM4SF4P48230 MIR4275-201ENST00000636486 87 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 AL390237.1-201ENST00000404226 1415 ntBASIC4.35□□□□□ -1.71
TM4SF4P48230 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TM4SF4P48230 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.35□□□□□ -1.71
TM4SF4P48230 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TM4SF4P48230 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TM4SF4P48230 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TM4SF4P48230 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TM4SF4P48230 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TM4SF4P48230 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TM4SF4P48230 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TM4SF4P48230 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TM4SF4P48230 SNORA31-201ENST00000362607 130 ntBASIC4.34□□□□□ -1.71
TM4SF4P48230 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
TM4SF4P48230 RNU6-637P-201ENST00000384050 107 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms