Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.88□□□□□ -2.11
HTTP42858 CKAP2P1-201ENST00000555477 2049 ntBASIC1.88□□□□□ -2.11
HTTP42858 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
HTTP42858 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HTTP42858 EIF1AXP1-201ENST00000419267 435 ntBASIC1.88□□□□□ -2.11
HTTP42858 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.88□□□□□ -2.11
HTTP42858 MIR6734-201ENST00000621166 68 ntBASIC1.88□□□□□ -2.11
HTTP42858 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HTTP42858 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
HTTP42858 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HTTP42858 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HTTP42858 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
HTTP42858 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.87□□□□□ -2.11
HTTP42858 HMGB1P12-201ENST00000438594 598 ntBASIC1.87□□□□□ -2.11
HTTP42858 KATNBL1P3-201ENST00000443475 909 ntBASIC1.87□□□□□ -2.11
HTTP42858 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.87□□□□□ -2.11
HTTP42858 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HTTP42858 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.87□□□□□ -2.11
HTTP42858 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.87□□□□□ -2.11
HTTP42858 AC136443.5-201ENST00000603741 370 ntBASIC1.87□□□□□ -2.11
HTTP42858 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.87□□□□□ -2.11
HTTP42858 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.87□□□□□ -2.11
HTTP42858 OR4G1P-203ENST00000641984 1631 ntBASIC1.87□□□□□ -2.11
HTTP42858 Y_RNA.68-201ENST00000362881 102 ntBASIC1.87□□□□□ -2.11
HTTP42858 MIR548J-201ENST00000408833 112 ntBASIC1.87□□□□□ -2.11
HTTP42858 CALM1P2-201ENST00000452941 448 ntBASIC1.87□□□□□ -2.11
HTTP42858 AP000705.1-201ENST00000454567 350 ntBASIC1.87□□□□□ -2.11
HTTP42858 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.87□□□□□ -2.11
HTTP42858 AC104581.2-201ENST00000572227 430 ntBASIC1.87□□□□□ -2.11
HTTP42858 AL031274.2-201ENST00000599419 203 ntBASIC1.87□□□□□ -2.11
HTTP42858 VIS1.1-201ENST00000610517 203 ntBASIC1.87□□□□□ -2.11
HTTP42858 MIR7973-1-201ENST00000614683 76 ntBASIC1.87□□□□□ -2.11
HTTP42858 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HTTP42858 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
HTTP42858 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HTTP42858 RNU4-13P-201ENST00000364019 141 ntBASIC1.86□□□□□ -2.11
HTTP42858 AL121972.1-201ENST00000402023 252 ntBASIC1.86□□□□□ -2.11
HTTP42858 RNU6-174P-201ENST00000410406 106 ntBASIC1.86□□□□□ -2.11
HTTP42858 TPMTP3-201ENST00000411928 735 ntBASIC1.86□□□□□ -2.11
HTTP42858 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.86□□□□□ -2.11
HTTP42858 AC087241.2-201ENST00000535801 324 ntBASIC1.86□□□□□ -2.11
HTTP42858 MTCO3P13-201ENST00000577757 781 ntBASIC1.86□□□□□ -2.11
HTTP42858 AC073869.7-201ENST00000640874 297 ntBASIC1.86□□□□□ -2.11
HTTP42858 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HTTP42858 MAPK10-266ENST00000641066 6555 ntBASIC1.86□□□□□ -2.11
HTTP42858 RNU6-1080P-201ENST00000383982 107 ntBASIC1.86□□□□□ -2.11
HTTP42858 MTCO3P30-201ENST00000426425 670 ntBASIC1.86□□□□□ -2.11
HTTP42858 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.86□□□□□ -2.11
HTTP42858 AC093767.1-201ENST00000504523 156 ntBASIC1.86□□□□□ -2.11
HTTP42858 HMGB1P47-201ENST00000511281 589 ntBASIC1.86□□□□□ -2.11
HTTP42858 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.86□□□□□ -2.11
HTTP42858 RNA5SP27-201ENST00000363839 119 ntBASIC1.86□□□□□ -2.11
HTTP42858 DHFRP5-201ENST00000406944 564 ntBASIC1.86□□□□□ -2.11
HTTP42858 SAR1AP4-201ENST00000429225 591 ntBASIC1.86□□□□□ -2.11
HTTP42858 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.86□□□□□ -2.11
HTTP42858 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.86□□□□□ -2.11
HTTP42858 AP005137.2-201ENST00000609238 400 ntBASIC1.86□□□□□ -2.11
HTTP42858 AL137847.3-201ENST00000611521 109 ntBASIC1.86□□□□□ -2.11
HTTP42858 AC098679.5-201ENST00000624394 571 ntBASIC1.86□□□□□ -2.11
HTTP42858 MIR1183-201ENST00000408856 89 ntBASIC1.85□□□□□ -2.11
HTTP42858 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.85□□□□□ -2.11
HTTP42858 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
HTTP42858 AC103810.1-201ENST00000579873 453 ntBASIC1.85□□□□□ -2.11
HTTP42858 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
HTTP42858 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
HTTP42858 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
HTTP42858 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HTTP42858 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HTTP42858 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.85□□□□□ -2.11
HTTP42858 AC124283.4-201ENST00000581815 456 ntBASIC1.85□□□□□ -2.11
HTTP42858 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
HTTP42858 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.84□□□□□ -2.11
HTTP42858 RNU7-170P-201ENST00000459303 61 ntBASIC1.84□□□□□ -2.11
HTTP42858 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.84□□□□□ -2.11
HTTP42858 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.84□□□□□ -2.11
HTTP42858 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.84□□□□□ -2.11
HTTP42858 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.84□□□□□ -2.11
HTTP42858 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
HTTP42858 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HTTP42858 RNU1-42P-201ENST00000364033 160 ntBASIC1.84□□□□□ -2.11
HTTP42858 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.84□□□□□ -2.11
HTTP42858 AC104435.1-201ENST00000483483 166 ntBASIC1.84□□□□□ -2.11
HTTP42858 AC090751.1-201ENST00000566966 267 ntBASIC1.84□□□□□ -2.11
HTTP42858 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
HTTP42858 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
HTTP42858 ZNF876P-202ENST00000398732 1485 ntBASIC1.84□□□□□ -2.12
HTTP42858 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
HTTP42858 AC092326.2-201ENST00000624772 1561 ntBASIC1.84□□□□□ -2.12
HTTP42858 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
HTTP42858 Y_RNA.433-201ENST00000384089 102 ntBASIC1.84□□□□□ -2.12
HTTP42858 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.84□□□□□ -2.12
HTTP42858 NDUFB4P5-201ENST00000415445 361 ntBASIC1.84□□□□□ -2.12
HTTP42858 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.84□□□□□ -2.12
HTTP42858 AL590664.1-201ENST00000448065 339 ntBASIC1.84□□□□□ -2.12
HTTP42858 AC016957.1-201ENST00000534895 309 ntBASIC1.84□□□□□ -2.12
HTTP42858 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.84□□□□□ -2.12
HTTP42858 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.84□□□□□ -2.12
HTTP42858 BX649567.1-201ENST00000642071 1134 ntBASIC1.84□□□□□ -2.12
HTTP42858 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.83□□□□□ -2.12
HTTP42858 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms