Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TNFSF9P41273 SNORD116-23-201ENST00000384645 92 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 RNU6-932P-201ENST00000391108 106 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 RNU6-1077P-201ENST00000410506 102 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 RPLP0P7-201ENST00000416050 667 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 SFR1P2-201ENST00000421841 730 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 Z93242.1-201ENST00000427102 353 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.83□□□□□ -1.96
TNFSF9P41273 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.83□□□□□ -1.96
TNFSF9P41273 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.83□□□□□ -1.96
TNFSF9P41273 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.83□□□□□ -1.96
TNFSF9P41273 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.83□□□□□ -1.96
TNFSF9P41273 MTND2P19-201ENST00000449129 1012 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.83□□□□□ -1.96
TNFSF9P41273 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.83□□□□□ -1.96
TNFSF9P41273 RNA5SP310-201ENST00000459084 116 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 AC008379.1-201ENST00000463655 464 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TNFSF9P41273 AC078857.1-201ENST00000469870 667 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 RNU6-27P-201ENST00000516146 107 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 SNORD59.2-201ENST00000516873 68 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 OR8K2P-201ENST00000524645 927 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 AP001804.3-201ENST00000525146 880 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 AL391156.1-201ENST00000554965 554 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.83□□□□□ -1.96
TNFSF9P41273 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.83□□□□□ -1.96
TNFSF9P41273 AC098483.2-201ENST00000603158 454 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 AC106900.2-201ENST00000604994 317 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 AC055876.5-201ENST00000605667 259 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 AC013412.1-201ENST00000610687 192 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.83□□□□□ -1.96
TNFSF9P41273 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.83□□□□□ -1.96
TNFSF9P41273 ZNF663P-202ENST00000641770 1131 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
TNFSF9P41273 AP000526.1-201ENST00000603308 1388 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TNFSF9P41273 AL049780.3-201ENST00000624612 1583 ntBASIC2.83□□□□□ -1.96
TNFSF9P41273 AL359693.1-201ENST00000614959 2407 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
TNFSF9P41273 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TNFSF9P41273 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.82□□□□□ -1.96
TNFSF9P41273 AL024474.1-201ENST00000404655 591 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AL136133.1-201ENST00000413694 376 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFSF9P41273 USP9YP20-201ENST00000419224 558 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.82□□□□□ -1.96
TNFSF9P41273 AC012498.1-201ENST00000424037 437 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AC233728.2-201ENST00000425348 757 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.82□□□□□ -1.96
TNFSF9P41273 RPL23AP74-201ENST00000437246 471 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFSF9P41273 AL050341.1-201ENST00000447743 313 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 RPS3P1-201ENST00000456781 192 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 RPL32P14-201ENST00000463196 378 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.82□□□□□ -1.96
TNFSF9P41273 AC092185.1-201ENST00000491371 97 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.82□□□□□ -1.96
TNFSF9P41273 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFSF9P41273 AC006390.1-201ENST00000508068 283 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 COL6A4P2-205ENST00000509855 506 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFSF9P41273 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFSF9P41273 RNA5SP282-201ENST00000516355 108 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.82□□□□□ -1.96
TNFSF9P41273 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.82□□□□□ -1.96
TNFSF9P41273 ARL2BPP5-201ENST00000523141 481 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.82□□□□□ -1.96
TNFSF9P41273 AC243972.3-201ENST00000539655 198 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AC006518.2-201ENST00000542513 940 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AC128657.1-201ENST00000549459 145 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFSF9P41273 TRAV37-201ENST00000553906 342 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFSF9P41273 AC093519.1-201ENST00000566109 298 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AC124283.4-201ENST00000581815 456 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.82□□□□□ -1.96
TNFSF9P41273 AC006116.7-201ENST00000590141 756 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.82□□□□□ -1.96
TNFSF9P41273 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.82□□□□□ -1.96
TNFSF9P41273 AC106028.5-201ENST00000610332 395 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
TNFSF9P41273 VN1R74P-201ENST00000613259 503 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 AC073592.7-201ENST00000623659 507 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 BX649567.1-201ENST00000642071 1134 ntBASIC2.82□□□□□ -1.96
TNFSF9P41273 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
TNFSF9P41273 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.81□□□□□ -1.96
TNFSF9P41273 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
TNFSF9P41273 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TNFSF9P41273 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TNFSF9P41273 RNA5SP68-201ENST00000363885 119 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 U3.12-201ENST00000364498 214 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
TNFSF9P41273 RNA5SP210-201ENST00000391034 120 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 U3.29-201ENST00000391296 212 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 SAR1AP2-201ENST00000392696 594 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFSF9P41273 AC099677.1-201ENST00000420575 175 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFSF9P41273 TRIAP1P1-201ENST00000427062 225 ntBASIC2.81□□□□□ -1.96
TNFSF9P41273 MTATP6P4-201ENST00000427725 675 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms