Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SCN4AP35499 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SCN4AP35499 RNU2-72P-201ENST00000411175 163 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 AC008173.1-201ENST00000418901 264 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 ELOCP11-201ENST00000436690 332 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.72□□□□□ -1.97
SCN4AP35499 ELOCP16-201ENST00000444494 332 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SCN4AP35499 HMGB3P21-201ENST00000452483 547 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 MTCO3P11-201ENST00000455103 774 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 AC010683.1-201ENST00000473673 378 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 MTND5P4-201ENST00000514978 288 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN4AP35499 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN4AP35499 NOP56P3-201ENST00000549457 385 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 OR4U1P-201ENST00000554958 912 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 AL136520.1-202ENST00000555494 763 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN4AP35499 AC090751.1-201ENST00000566966 267 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 MIR4781-201ENST00000585250 76 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.72□□□□□ -1.97
SCN4AP35499 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SCN4AP35499 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SCN4AP35499 HNRNPDP2-201ENST00000406475 478 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 MIR1303-201ENST00000408625 86 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 XKRYP4-201ENST00000414395 483 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 AC019070.1-201ENST00000415008 1024 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 SPA17P1-201ENST00000416656 452 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.72□□□□□ -1.97
SCN4AP35499 RPL39P40-201ENST00000445481 146 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 XKRYP5-201ENST00000449659 483 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 RPS27P27-201ENST00000498779 255 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 COL6A4P2-205ENST00000509855 506 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 OSBPL9P3-201ENST00000534523 595 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 AC025281.1-201ENST00000567026 265 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.72□□□□□ -1.97
SCN4AP35499 AP003117.2-201ENST00000606010 545 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 AL359198.2-201ENST00000611836 194 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN4AP35499 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.72□□□□□ -1.97
SCN4AP35499 AC005539.1-201ENST00000443768 1479 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 AC006378.2-201ENST00000623178 2476 ntBASIC2.72□□□□□ -1.97
SCN4AP35499 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.71□□□□□ -1.97
SCN4AP35499 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SCN4AP35499 Y_RNA.40-201ENST00000362645 93 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 RNU6-1005P-201ENST00000384519 107 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 SNORA26.9-201ENST00000391322 122 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.71□□□□□ -1.98
SCN4AP35499 Z82205.1-201ENST00000428456 297 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 RPL17P35-201ENST00000432217 549 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 CR769767.1-201ENST00000436337 346 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 AL031663.1-201ENST00000437445 219 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 RPS7P5-201ENST00000441482 581 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.71□□□□□ -1.98
SCN4AP35499 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.71□□□□□ -1.98
SCN4AP35499 AC092754.2-201ENST00000463506 460 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 RNA5SP445-201ENST00000515889 115 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 AC068339.2-201ENST00000534395 618 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 AC004486.1-201ENST00000546846 233 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.71□□□□□ -1.98
SCN4AP35499 AC079148.1-201ENST00000565944 819 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 AC124283.4-201ENST00000581815 456 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 AP001033.2-201ENST00000609701 1003 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 AL445493.3-201ENST00000619568 477 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 AP000720.1-201ENST00000625091 483 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.71□□□□□ -1.98
SCN4AP35499 MTND5P28-201ENST00000438005 1594 ntBASIC2.71□□□□□ -1.98
SCN4AP35499 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
SCN4AP35499 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
SCN4AP35499 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCN4AP35499 FRG1BP-201ENST00000278882 761 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 SNORD115-48-201ENST00000364764 76 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 Y_RNA.508-201ENST00000384502 114 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 UBE2V1P6-201ENST00000430840 422 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.7□□□□□ -1.98
SCN4AP35499 RPL36AP33-201ENST00000450395 310 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 XKRY-201ENST00000510392 1100 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 RNU6-1102P-201ENST00000516149 96 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 SMARCE1P4-201ENST00000523647 241 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 AK6P1-201ENST00000540219 478 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.7□□□□□ -1.98
SCN4AP35499 AC112503.2-201ENST00000609005 552 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.7□□□□□ -1.98
SCN4AP35499 AC097460.3-201ENST00000623099 442 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 AC010297.1-201ENST00000623948 149 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
SCN4AP35499 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SCN4AP35499 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCN4AP35499 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCN4AP35499 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCN4AP35499 FAM35CP-201ENST00000554755 2470 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCN4AP35499 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SCN4AP35499 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SCN4AP35499 LINC01347-201ENST00000417964 355 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 AC108667.1-201ENST00000428618 249 ntBASIC2.7□□□□□ -1.98
SCN4AP35499 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN4AP35499 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
SCN4AP35499 ARL5AP2-201ENST00000444698 533 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms