Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.91□□□□□ -1.94
SHMT2P34897 AC117440.1-201ENST00000474107 571 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 RPS29P2-201ENST00000479278 136 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 OR4G11P-201ENST00000492842 939 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 AL024509.2-201ENST00000493462 493 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 AC010460.2-201ENST00000509054 677 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.91□□□□□ -1.94
SHMT2P34897 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.91□□□□□ -1.94
SHMT2P34897 RN7SKP31-201ENST00000516354 278 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.91□□□□□ -1.94
SHMT2P34897 AC022080.3-201ENST00000544433 482 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 AL121603.1-201ENST00000553815 142 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.91□□□□□ -1.94
SHMT2P34897 AC012182.1-201ENST00000570133 895 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 MTND3P13-201ENST00000574391 343 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.91□□□□□ -1.94
SHMT2P34897 AC078899.3-201ENST00000599065 212 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 AC005000.2-201ENST00000605468 310 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 AC097504.2-201ENST00000608088 454 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 AL136370.1-201ENST00000608166 691 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 PART1_2.1-201ENST00000612397 250 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.91□□□□□ -1.94
SHMT2P34897 AC109315.1-201ENST00000584143 1347 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SHMT2P34897 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHMT2P34897 ZNF833P-201ENST00000424938 1494 ntBASIC2.9□□□□□ -1.94
SHMT2P34897 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SHMT2P34897 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
SHMT2P34897 AL035425.3-201ENST00000564206 4996 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 GNG5P1-201ENST00000255500 204 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHMT2P34897 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.9□□□□□ -1.95
SHMT2P34897 RNU6-216P-201ENST00000363282 104 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 SNORA48.2-201ENST00000390926 124 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 RPL5P18-201ENST00000406671 891 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 RNU2-42P-201ENST00000410697 113 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 VN1R51P-201ENST00000411675 945 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 AC092447.6-201ENST00000414578 210 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 AL354692.1-201ENST00000423044 315 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 RPL35AP12-201ENST00000425362 338 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.9□□□□□ -1.95
SHMT2P34897 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.9□□□□□ -1.95
SHMT2P34897 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.9□□□□□ -1.95
SHMT2P34897 NANOGNBP1-201ENST00000448444 480 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 MTND2P19-201ENST00000449129 1012 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 RPL7P52-201ENST00000449200 742 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 SSXP4-201ENST00000451349 245 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 RFC5P1-201ENST00000454419 874 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 MTCO3P35-201ENST00000485582 781 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.9□□□□□ -1.95
SHMT2P34897 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.9□□□□□ -1.95
SHMT2P34897 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.9□□□□□ -1.95
SHMT2P34897 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.9□□□□□ -1.95
SHMT2P34897 AC126177.3-201ENST00000551839 688 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.9□□□□□ -1.95
SHMT2P34897 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.9□□□□□ -1.95
SHMT2P34897 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.9□□□□□ -1.95
SHMT2P34897 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SHMT2P34897 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.9□□□□□ -1.95
SHMT2P34897 MAGOH2P-202ENST00000584384 429 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.9□□□□□ -1.95
SHMT2P34897 AC083760.1-201ENST00000589621 670 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 AC245036.5-201ENST00000596330 847 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.9□□□□□ -1.95
SHMT2P34897 AL390838.2-201ENST00000602394 274 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 AC012669.1-201ENST00000603209 283 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 AC093732.2-201ENST00000607950 274 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 AC005332.6-201ENST00000613178 446 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 AC120349.2-201ENST00000625002 298 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 AC091925.2-201ENST00000625059 256 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 MIR6733-201ENST00000635723 61 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 AC107982.1-201ENST00000507171 1300 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 API5P2-201ENST00000397055 1498 ntBASIC2.9□□□□□ -1.95
SHMT2P34897 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SHMT2P34897 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.89□□□□□ -1.95
SHMT2P34897 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.89□□□□□ -1.95
SHMT2P34897 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
SHMT2P34897 SNRPEP3-201ENST00000338402 276 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SHMT2P34897 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.89□□□□□ -1.95
SHMT2P34897 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHMT2P34897 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHMT2P34897 Y_RNA.408-201ENST00000383987 102 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 RNU6-851P-201ENST00000384565 107 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 RPS3AP26-201ENST00000398259 784 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.89□□□□□ -1.95
SHMT2P34897 RNA5SP344-201ENST00000411081 104 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 Z92545.1-201ENST00000411782 234 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.89□□□□□ -1.95
SHMT2P34897 MTCO3P12-201ENST00000416718 547 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.89□□□□□ -1.95
SHMT2P34897 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.89□□□□□ -1.95
SHMT2P34897 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.89□□□□□ -1.95
SHMT2P34897 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.89□□□□□ -1.95
SHMT2P34897 USP9YP34-201ENST00000453983 808 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.89□□□□□ -1.95
SHMT2P34897 snoU109.4-201ENST00000458953 143 ntBASIC2.89□□□□□ -1.95
SHMT2P34897 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms