Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.14□□□□□ -1.75
CIITAP33076 AP003385.6-201ENST00000531603 374 ntBASIC4.14□□□□□ -1.75
CIITAP33076 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.14□□□□□ -1.75
CIITAP33076 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.14□□□□□ -1.75
CIITAP33076 MIR4528-201ENST00000577763 90 ntBASIC4.14□□□□□ -1.75
CIITAP33076 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.14□□□□□ -1.75
CIITAP33076 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.14□□□□□ -1.75
CIITAP33076 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.14□□□□□ -1.75
CIITAP33076 BNIP3P22-201ENST00000593399 556 ntBASIC4.14□□□□□ -1.75
CIITAP33076 BCRP9-201ENST00000605312 388 ntBASIC4.14□□□□□ -1.75
CIITAP33076 SNORA51-201ENST00000606420 132 ntBASIC4.14□□□□□ -1.75
CIITAP33076 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.14□□□□□ -1.75
CIITAP33076 AL713922.2-201ENST00000619384 716 ntBASIC4.14□□□□□ -1.75
CIITAP33076 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.14□□□□□ -1.75
CIITAP33076 AC009093.8-201ENST00000641769 292 ntBASIC4.14□□□□□ -1.75
CIITAP33076 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CIITAP33076 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CIITAP33076 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CIITAP33076 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CIITAP33076 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CIITAP33076 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CIITAP33076 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.13□□□□□ -1.75
CIITAP33076 AC007685.1-201ENST00000329806 452 ntBASIC4.13□□□□□ -1.75
CIITAP33076 RNU6-343P-201ENST00000364709 104 ntBASIC4.13□□□□□ -1.75
CIITAP33076 MT-TC-201ENST00000387405 66 ntBASIC4.13□□□□□ -1.75
CIITAP33076 RNU6-837P-201ENST00000391056 108 ntBASIC4.13□□□□□ -1.75
CIITAP33076 HSPE1P8-201ENST00000406997 288 ntBASIC4.13□□□□□ -1.75
CIITAP33076 AC109780.2-201ENST00000413467 845 ntBASIC4.13□□□□□ -1.75
CIITAP33076 TPMTP2-201ENST00000414372 726 ntBASIC4.13□□□□□ -1.75
CIITAP33076 ELOCP17-201ENST00000414751 326 ntBASIC4.13□□□□□ -1.75
CIITAP33076 RPS27AP14-201ENST00000422868 454 ntBASIC4.13□□□□□ -1.75
CIITAP33076 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.13□□□□□ -1.75
CIITAP33076 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.13□□□□□ -1.75
CIITAP33076 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.13□□□□□ -1.75
CIITAP33076 RPL7P28-201ENST00000437739 740 ntBASIC4.13□□□□□ -1.75
CIITAP33076 AL831737.1-201ENST00000441288 271 ntBASIC4.13□□□□□ -1.75
CIITAP33076 MTND5P14-201ENST00000441481 1267 ntBASIC4.13□□□□□ -1.75
CIITAP33076 AC104073.1-201ENST00000451988 151 ntBASIC4.13□□□□□ -1.75
CIITAP33076 SNORD105B-201ENST00000458770 79 ntBASIC4.13□□□□□ -1.75
CIITAP33076 AC026410.2-201ENST00000460281 156 ntBASIC4.13□□□□□ -1.75
CIITAP33076 AP000873.1-201ENST00000463987 400 ntBASIC4.13□□□□□ -1.75
CIITAP33076 SRRM1P2-201ENST00000464531 1192 ntBASIC4.13□□□□□ -1.75
CIITAP33076 RPL31P50-201ENST00000471002 296 ntBASIC4.13□□□□□ -1.75
CIITAP33076 AL136126.1-201ENST00000473603 402 ntBASIC4.13□□□□□ -1.75
CIITAP33076 AC106707.2-201ENST00000484182 374 ntBASIC4.13□□□□□ -1.75
CIITAP33076 RPL21P129-201ENST00000491732 478 ntBASIC4.13□□□□□ -1.75
CIITAP33076 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.13□□□□□ -1.75
CIITAP33076 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CIITAP33076 AC005798.1-201ENST00000513715 387 ntBASIC4.13□□□□□ -1.75
CIITAP33076 AC025881.1-201ENST00000518851 512 ntBASIC4.13□□□□□ -1.75
CIITAP33076 DUXAP2-201ENST00000519198 589 ntBASIC4.13□□□□□ -1.75
CIITAP33076 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.13□□□□□ -1.75
CIITAP33076 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.13□□□□□ -1.75
CIITAP33076 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.13□□□□□ -1.75
CIITAP33076 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.13□□□□□ -1.75
CIITAP33076 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.13□□□□□ -1.75
CIITAP33076 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.13□□□□□ -1.75
CIITAP33076 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.13□□□□□ -1.75
CIITAP33076 MIR5697-201ENST00000578045 78 ntBASIC4.13□□□□□ -1.75
CIITAP33076 MIR1254-2-201ENST00000579553 63 ntBASIC4.13□□□□□ -1.75
CIITAP33076 MIR544B-201ENST00000582372 78 ntBASIC4.13□□□□□ -1.75
CIITAP33076 AC005771.1-201ENST00000585581 349 ntBASIC4.13□□□□□ -1.75
CIITAP33076 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.13□□□□□ -1.75
CIITAP33076 AC091805.2-201ENST00000603848 235 ntBASIC4.13□□□□□ -1.75
CIITAP33076 BNIP3P11-201ENST00000603878 563 ntBASIC4.13□□□□□ -1.75
CIITAP33076 HMGB1P50-201ENST00000605814 607 ntBASIC4.13□□□□□ -1.75
CIITAP33076 MIR486-1-201ENST00000612171 68 ntBASIC4.13□□□□□ -1.75
CIITAP33076 AL732618.1-201ENST00000623251 301 ntBASIC4.13□□□□□ -1.75
CIITAP33076 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.13□□□□□ -1.75
CIITAP33076 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CIITAP33076 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CIITAP33076 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CIITAP33076 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.13□□□□□ -1.75
CIITAP33076 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CIITAP33076 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CIITAP33076 FAM35DP-201ENST00000323387 2712 ntBASIC4.12□□□□□ -1.75
CIITAP33076 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CIITAP33076 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CIITAP33076 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CIITAP33076 SNORD9-201ENST00000362566 104 ntBASIC4.12□□□□□ -1.75
CIITAP33076 SNORA62.3-201ENST00000365110 153 ntBASIC4.12□□□□□ -1.75
CIITAP33076 RNU5E-5P-201ENST00000365379 116 ntBASIC4.12□□□□□ -1.75
CIITAP33076 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CIITAP33076 RPL31P1-201ENST00000398116 372 ntBASIC4.12□□□□□ -1.75
CIITAP33076 RNU6-248P-201ENST00000410720 107 ntBASIC4.12□□□□□ -1.75
CIITAP33076 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.12□□□□□ -1.75
CIITAP33076 RPL17P12-201ENST00000413391 526 ntBASIC4.12□□□□□ -1.75
CIITAP33076 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.12□□□□□ -1.75
CIITAP33076 AC104651.1-201ENST00000427559 735 ntBASIC4.12□□□□□ -1.75
CIITAP33076 CYCSP4-201ENST00000429682 331 ntBASIC4.12□□□□□ -1.75
CIITAP33076 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.12□□□□□ -1.75
CIITAP33076 GOT2P5-201ENST00000433995 546 ntBASIC4.12□□□□□ -1.75
CIITAP33076 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CIITAP33076 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.12□□□□□ -1.75
CIITAP33076 SUMO2P2-201ENST00000456482 255 ntBASIC4.12□□□□□ -1.75
CIITAP33076 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.12□□□□□ -1.75
CIITAP33076 SNORD42A-201ENST00000459584 64 ntBASIC4.12□□□□□ -1.75
CIITAP33076 RN7SL93P-201ENST00000463035 293 ntBASIC4.12□□□□□ -1.75
CIITAP33076 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.12□□□□□ -1.75
CIITAP33076 AC078817.1-201ENST00000492623 435 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms