Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RNA5SP88-201ENST00000365560 109 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 RNU6-629P-201ENST00000384061 103 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 RNU6-1181P-201ENST00000384191 106 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 SNORD116-1-201ENST00000384335 95 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HOXA13P31271 RPS3AP26-201ENST00000398259 784 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 RNU2-47P-201ENST00000410649 186 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 RNU4-72P-201ENST00000410754 173 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 HMGN1P24-201ENST00000412282 298 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXA13P31271 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXA13P31271 EI24P1-201ENST00000416584 867 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXA13P31271 MTND4P20-201ENST00000424125 869 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 MTND1P20-201ENST00000430341 950 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXA13P31271 AC092473.1-201ENST00000441098 221 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 Z75741.1-201ENST00000446793 314 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 NPM1P49-201ENST00000448027 714 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 snoU13.8-201ENST00000458890 104 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 RPL31P50-201ENST00000471002 296 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA13P31271 AC078817.1-201ENST00000492623 435 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 AC112198.1-201ENST00000505369 1220 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
HOXA13P31271 AC026427.2-201ENST00000506228 536 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 AC024589.1-201ENST00000512207 263 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXA13P31271 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.83□□□□□ -1.8
HOXA13P31271 RNU2-58P-201ENST00000516403 183 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 RNA5SP309-201ENST00000516670 106 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXA13P31271 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.83□□□□□ -1.8
HOXA13P31271 AC037471.2-201ENST00000564941 598 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 AC135628.1-201ENST00000568867 534 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXA13P31271 ZNF415P1-201ENST00000582279 1166 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXA13P31271 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXA13P31271 VN1R90P-201ENST00000595717 726 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 VN1R92P-201ENST00000598511 928 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 AL606834.2-201ENST00000602954 668 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 Z99497.2-201ENST00000603634 310 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.83□□□□□ -1.8
HOXA13P31271 VIS1.1-201ENST00000610517 203 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 AC084782.3-201ENST00000612282 578 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 AL031667.3-201ENST00000620124 655 ntBASIC3.83□□□□□ -1.8
HOXA13P31271 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXA13P31271 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXA13P31271 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXA13P31271 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA13P31271 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA13P31271 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXA13P31271 Z83843.1-201ENST00000604070 3685 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXA13P31271 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA13P31271 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
HOXA13P31271 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXA13P31271 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA13P31271 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA13P31271 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA13P31271 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA13P31271 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA13P31271 AC090960.1-201ENST00000421072 306 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA13P31271 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA13P31271 MTCYBP39-201ENST00000437562 491 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 THAP5P1-201ENST00000439089 262 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA13P31271 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 AL445669.2-201ENST00000454425 421 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 snoU109.4-201ENST00000458953 143 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXA13P31271 HMGB1P25-201ENST00000468402 607 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 AC010285.1-201ENST00000470580 392 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA13P31271 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
HOXA13P31271 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.82□□□□□ -1.8
HOXA13P31271 RN7SKP57-201ENST00000517248 293 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA13P31271 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA13P31271 AC090888.1-201ENST00000561335 1141 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 AC006270.2-201ENST00000578523 652 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 SNORD84-203ENST00000584275 78 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 PIGPP4-201ENST00000584447 307 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXA13P31271 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA13P31271 BNIP3P23-201ENST00000599655 511 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 AL031176.1-201ENST00000604554 466 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 AL357080.1-201ENST00000617394 239 ntBASIC3.82□□□□□ -1.8
HOXA13P31271 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA13P31271 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXA13P31271 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA13P31271 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
HOXA13P31271 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXA13P31271 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA13P31271 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA13P31271 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms