Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RPL21P23-201ENST00000446654 460 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 TRGVB-201ENST00000453257 471 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.99□□□□□ -1.77
HOXA11P31270 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA11P31270 SNORD105B-201ENST00000458770 79 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA11P31270 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA11P31270 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.99□□□□□ -1.77
HOXA11P31270 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXA11P31270 AC006499.2-201ENST00000513470 337 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.99□□□□□ -1.77
HOXA11P31270 RNU6-202P-201ENST00000515998 96 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 RN7SKP244-201ENST00000516513 307 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA11P31270 ARL2BPP5-201ENST00000523141 481 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.99□□□□□ -1.77
HOXA11P31270 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA11P31270 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.99□□□□□ -1.77
HOXA11P31270 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.99□□□□□ -1.77
HOXA11P31270 MIR4644-201ENST00000579929 84 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.99□□□□□ -1.77
HOXA11P31270 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.99□□□□□ -1.77
HOXA11P31270 SNRPGP15-201ENST00000600149 222 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 AL022154.1-201ENST00000604698 785 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 AC233309.1-201ENST00000619522 751 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 AL357559.1-201ENST00000622228 274 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 AC019226.1-201ENST00000625666 515 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 AC244258.1-201ENST00000637553 1071 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXA11P31270 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HOXA11P31270 ZNF37BP-203ENST00000452306 1352 ntBASIC3.99□□□□□ -1.77
HOXA11P31270 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HOXA11P31270 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXA11P31270 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
HOXA11P31270 OR5BR1P-201ENST00000524992 1330 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXA11P31270 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA11P31270 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXA11P31270 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA11P31270 AF127577.6-201ENST00000623352 2191 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA11P31270 Y_RNA.88-201ENST00000363029 99 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA11P31270 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA11P31270 AC245052.5-201ENST00000416320 649 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.98□□□□□ -1.77
HOXA11P31270 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 ISCA1P1-201ENST00000426679 387 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 AC104651.1-201ENST00000427559 735 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 NEK4P1-201ENST00000433383 879 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 NDUFB1P1-201ENST00000435191 180 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 PRDX3P3-201ENST00000447765 522 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 AC023424.2-201ENST00000493479 777 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXA11P31270 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA11P31270 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA11P31270 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXA11P31270 RNU6-583P-201ENST00000516012 92 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA11P31270 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXA11P31270 EEF1B2P4-201ENST00000551398 348 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXA11P31270 ZNF192P1-203ENST00000565888 810 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 AC234778.2-201ENST00000566241 354 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXA11P31270 AC010591.1-201ENST00000603941 649 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 U3.45-201ENST00000607547 219 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 AC090517.2-201ENST00000614966 680 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 AC079228.1-201ENST00000624774 1049 ntBASIC3.98□□□□□ -1.77
HOXA11P31270 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA11P31270 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA11P31270 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA11P31270 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXA11P31270 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA11P31270 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXA11P31270 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
HOXA11P31270 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA11P31270 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA11P31270 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HOXA11P31270 BDP1P-201ENST00000582658 1990 ntBASIC3.97□□□□□ -1.77
HOXA11P31270 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA11P31270 Y_RNA.248-201ENST00000364501 109 ntBASIC3.97□□□□□ -1.77
HOXA11P31270 RNU6-335P-201ENST00000364563 113 ntBASIC3.97□□□□□ -1.77
HOXA11P31270 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXA11P31270 RNU6-723P-201ENST00000383973 107 ntBASIC3.97□□□□□ -1.77
HOXA11P31270 RNU6-444P-201ENST00000383988 108 ntBASIC3.97□□□□□ -1.77
HOXA11P31270 MTCO3P1-205ENST00000422088 832 ntBASIC3.97□□□□□ -1.77
HOXA11P31270 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA11P31270 AL159987.2-201ENST00000432754 307 ntBASIC3.97□□□□□ -1.77
HOXA11P31270 UBE2V1P8-201ENST00000437166 265 ntBASIC3.97□□□□□ -1.77
HOXA11P31270 AL353572.1-201ENST00000442490 417 ntBASIC3.97□□□□□ -1.77
HOXA11P31270 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA11P31270 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXA11P31270 HMGN3P1-201ENST00000453847 193 ntBASIC3.97□□□□□ -1.77
HOXA11P31270 AP000797.1-201ENST00000478870 387 ntBASIC3.97□□□□□ -1.77
HOXA11P31270 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXA11P31270 AC091133.4-201ENST00000511142 308 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms