Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.87□□□□□ -1.47
VARSP26640 AC130360.1-201ENST00000425489 1117 ntBASIC5.87□□□□□ -1.47
VARSP26640 CYCSP43-201ENST00000438233 310 ntBASIC5.87□□□□□ -1.47
VARSP26640 PTMAP6-201ENST00000439110 327 ntBASIC5.87□□□□□ -1.47
VARSP26640 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.87□□□□□ -1.47
VARSP26640 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VARSP26640 AC087190.1-201ENST00000484462 480 ntBASIC5.87□□□□□ -1.47
VARSP26640 AC107032.1-201ENST00000485945 480 ntBASIC5.87□□□□□ -1.47
VARSP26640 RPL30P11-201ENST00000495304 339 ntBASIC5.87□□□□□ -1.47
VARSP26640 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.87□□□□□ -1.47
VARSP26640 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.87□□□□□ -1.47
VARSP26640 RNA5SP271-201ENST00000516700 88 ntBASIC5.87□□□□□ -1.47
VARSP26640 RN7SKP60-201ENST00000516985 239 ntBASIC5.87□□□□□ -1.47
VARSP26640 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.87□□□□□ -1.47
VARSP26640 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.87□□□□□ -1.47
VARSP26640 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.87□□□□□ -1.47
VARSP26640 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.87□□□□□ -1.47
VARSP26640 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.87□□□□□ -1.47
VARSP26640 OR1F2P-201ENST00000570470 933 ntBASIC5.87□□□□□ -1.47
VARSP26640 CPDP1-201ENST00000579660 283 ntBASIC5.87□□□□□ -1.47
VARSP26640 MIR4300-201ENST00000581016 96 ntBASIC5.87□□□□□ -1.47
VARSP26640 MIR3614-201ENST00000581261 86 ntBASIC5.87□□□□□ -1.47
VARSP26640 MIR4701-201ENST00000583094 63 ntBASIC5.87□□□□□ -1.47
VARSP26640 MIR4443-201ENST00000585052 53 ntBASIC5.87□□□□□ -1.47
VARSP26640 AC007566.2-201ENST00000603642 413 ntBASIC5.87□□□□□ -1.47
VARSP26640 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.87□□□□□ -1.47
VARSP26640 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.87□□□□□ -1.47
VARSP26640 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
VARSP26640 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.87□□□□□ -1.47
VARSP26640 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VARSP26640 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.87□□□□□ -1.47
VARSP26640 AL353796.1-201ENST00000561542 3241 ntBASIC5.87□□□□□ -1.47
VARSP26640 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VARSP26640 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VARSP26640 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VARSP26640 HAUS6P2-201ENST00000433254 2404 ntBASIC5.86□□□□□ -1.47
VARSP26640 DDX10P1-201ENST00000448545 1933 ntBASIC5.86□□□□□ -1.47
VARSP26640 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VARSP26640 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VARSP26640 SNORA21-201ENST00000362423 132 ntBASIC5.86□□□□□ -1.47
VARSP26640 SNORA5.1-201ENST00000384275 131 ntBASIC5.86□□□□□ -1.47
VARSP26640 AL080315.1-201ENST00000406055 466 ntBASIC5.86□□□□□ -1.47
VARSP26640 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.86□□□□□ -1.47
VARSP26640 RPS3P2-201ENST00000421346 701 ntBASIC5.86□□□□□ -1.47
VARSP26640 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.86□□□□□ -1.47
VARSP26640 CYCSP12-201ENST00000437729 300 ntBASIC5.86□□□□□ -1.47
VARSP26640 RPL23AP33-201ENST00000442301 452 ntBASIC5.86□□□□□ -1.47
VARSP26640 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.86□□□□□ -1.47
VARSP26640 AL162739.1-201ENST00000450606 307 ntBASIC5.86□□□□□ -1.47
VARSP26640 AC234775.1-201ENST00000454247 670 ntBASIC5.86□□□□□ -1.47
VARSP26640 RPL21P41-201ENST00000459863 264 ntBASIC5.86□□□□□ -1.47
VARSP26640 AC098847.1-201ENST00000473094 348 ntBASIC5.86□□□□□ -1.47
VARSP26640 RN7SL174P-201ENST00000475578 289 ntBASIC5.86□□□□□ -1.47
VARSP26640 AC025458.1-201ENST00000506046 166 ntBASIC5.86□□□□□ -1.47
VARSP26640 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.86□□□□□ -1.47
VARSP26640 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.86□□□□□ -1.47
VARSP26640 AC007956.1-201ENST00000555623 542 ntBASIC5.86□□□□□ -1.47
VARSP26640 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.86□□□□□ -1.47
VARSP26640 AC136932.1-201ENST00000574771 208 ntBASIC5.86□□□□□ -1.47
VARSP26640 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.86□□□□□ -1.47
VARSP26640 AC018809.2-201ENST00000602436 3823 ntBASIC5.86□□□□□ -1.47
VARSP26640 AC005344.1-201ENST00000613391 459 ntBASIC5.86□□□□□ -1.47
VARSP26640 AC245014.3-201ENST00000618589 347 ntBASIC5.86□□□□□ -1.47
VARSP26640 AC107027.3-201ENST00000565095 3473 ntBASIC5.86□□□□□ -1.47
VARSP26640 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VARSP26640 AP002512.4-202ENST00000641599 4530 ntBASIC5.86□□□□□ -1.47
VARSP26640 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.86□□□□□ -1.47
VARSP26640 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VARSP26640 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
VARSP26640 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VARSP26640 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.86□□□□□ -1.47
VARSP26640 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VARSP26640 EOGT-210ENST00000615922 1931 ntBASIC5.86□□□□□ -1.47
VARSP26640 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.85□□□□□ -1.47
VARSP26640 ZNF285B-201ENST00000561698 1767 ntBASIC5.85□□□□□ -1.47
VARSP26640 AC005332.5-201ENST00000591222 2919 ntBASIC5.85□□□□□ -1.47
VARSP26640 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VARSP26640 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.85□□□□□ -1.47
VARSP26640 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
VARSP26640 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.85□□□□□ -1.47
VARSP26640 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VARSP26640 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VARSP26640 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VARSP26640 AC090740.1-201ENST00000623193 2262 ntBASIC5.85□□□□□ -1.47
VARSP26640 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
VARSP26640 Y_RNA.27-201ENST00000362540 103 ntBASIC5.85□□□□□ -1.47
VARSP26640 RNU6-371P-201ENST00000364283 108 ntBASIC5.85□□□□□ -1.47
VARSP26640 SNORD50.2-201ENST00000365465 70 ntBASIC5.85□□□□□ -1.47
VARSP26640 Y_RNA.439-201ENST00000384119 94 ntBASIC5.85□□□□□ -1.47
VARSP26640 AL513475.1-201ENST00000406602 315 ntBASIC5.85□□□□□ -1.47
VARSP26640 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.85□□□□□ -1.47
VARSP26640 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.85□□□□□ -1.47
VARSP26640 RPL35AP31-201ENST00000418340 337 ntBASIC5.85□□□□□ -1.47
VARSP26640 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.85□□□□□ -1.47
VARSP26640 BX276092.6-201ENST00000430476 250 ntBASIC5.85□□□□□ -1.47
VARSP26640 AL159987.2-201ENST00000432754 307 ntBASIC5.85□□□□□ -1.47
VARSP26640 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VARSP26640 AC023141.3-201ENST00000436698 278 ntBASIC5.85□□□□□ -1.47
VARSP26640 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.85□□□□□ -1.47
VARSP26640 AC002553.3-201ENST00000453002 341 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms