Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD40P25942 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD40P25942 RNU6-173P-201ENST00000364215 104 ntBASIC4.29□□□□□ -1.72
CD40P25942 SNORA36C-201ENST00000384289 132 ntBASIC4.29□□□□□ -1.72
CD40P25942 RN7SKP263-201ENST00000411194 309 ntBASIC4.29□□□□□ -1.72
CD40P25942 RNA5SP111-201ENST00000411386 101 ntBASIC4.29□□□□□ -1.72
CD40P25942 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.29□□□□□ -1.72
CD40P25942 AL451054.2-201ENST00000420896 202 ntBASIC4.29□□□□□ -1.72
CD40P25942 HSPE1P1-201ENST00000421494 318 ntBASIC4.29□□□□□ -1.72
CD40P25942 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.29□□□□□ -1.72
CD40P25942 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.29□□□□□ -1.72
CD40P25942 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.29□□□□□ -1.72
CD40P25942 HMGB3P11-201ENST00000440127 604 ntBASIC4.29□□□□□ -1.72
CD40P25942 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.29□□□□□ -1.72
CD40P25942 PRPS1P1-201ENST00000445305 876 ntBASIC4.29□□□□□ -1.72
CD40P25942 RNU6-1208P-201ENST00000459588 107 ntBASIC4.29□□□□□ -1.72
CD40P25942 AC110792.1-201ENST00000491826 472 ntBASIC4.29□□□□□ -1.72
CD40P25942 AC106872.2-201ENST00000494303 480 ntBASIC4.29□□□□□ -1.72
CD40P25942 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CD40P25942 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.29□□□□□ -1.72
CD40P25942 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.29□□□□□ -1.72
CD40P25942 RNU6-352P-201ENST00000516908 107 ntBASIC4.29□□□□□ -1.72
CD40P25942 RN7SKP60-201ENST00000516985 239 ntBASIC4.29□□□□□ -1.72
CD40P25942 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.29□□□□□ -1.72
CD40P25942 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.29□□□□□ -1.72
CD40P25942 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.29□□□□□ -1.72
CD40P25942 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.29□□□□□ -1.72
CD40P25942 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.29□□□□□ -1.72
CD40P25942 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.29□□□□□ -1.72
CD40P25942 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.29□□□□□ -1.72
CD40P25942 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
CD40P25942 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.29□□□□□ -1.72
CD40P25942 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.29□□□□□ -1.72
CD40P25942 MIR4737-201ENST00000583979 81 ntBASIC4.29□□□□□ -1.72
CD40P25942 AC007687.1-201ENST00000602704 304 ntBASIC4.29□□□□□ -1.72
CD40P25942 AC104763.2-201ENST00000604179 382 ntBASIC4.29□□□□□ -1.72
CD40P25942 CTHRC1P1-201ENST00000605383 469 ntBASIC4.29□□□□□ -1.72
CD40P25942 AC135507.2-201ENST00000612443 309 ntBASIC4.29□□□□□ -1.72
CD40P25942 AL365204.3-201ENST00000612448 685 ntBASIC4.29□□□□□ -1.72
CD40P25942 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD40P25942 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CD40P25942 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.29□□□□□ -1.72
CD40P25942 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.29□□□□□ -1.72
CD40P25942 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.29□□□□□ -1.72
CD40P25942 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD40P25942 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CD40P25942 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD40P25942 AL136964.1-201ENST00000622038 2990 ntBASIC4.29□□□□□ -1.72
CD40P25942 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD40P25942 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.28□□□□□ -1.72
CD40P25942 LARP1BP1-201ENST00000506036 1359 ntBASIC4.28□□□□□ -1.72
CD40P25942 AC103710.2-202ENST00000641454 2853 ntBASIC4.28□□□□□ -1.72
CD40P25942 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD40P25942 AP000542.2-201ENST00000623199 6179 ntBASIC4.28□□□□□ -1.72
CD40P25942 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD40P25942 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD40P25942 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.28□□□□□ -1.72
CD40P25942 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CD40P25942 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD40P25942 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD40P25942 RNU4-79P-201ENST00000362764 141 ntBASIC4.28□□□□□ -1.72
CD40P25942 RNU6-288P-201ENST00000363690 104 ntBASIC4.28□□□□□ -1.72
CD40P25942 RNU6-1011P-201ENST00000384668 107 ntBASIC4.28□□□□□ -1.72
CD40P25942 CISD1P1-201ENST00000393907 327 ntBASIC4.28□□□□□ -1.72
CD40P25942 AC097374.1-203ENST00000400783 485 ntBASIC4.28□□□□□ -1.72
CD40P25942 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD40P25942 U3.32-201ENST00000408116 212 ntBASIC4.28□□□□□ -1.72
CD40P25942 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.28□□□□□ -1.72
CD40P25942 AC093414.1-201ENST00000434712 514 ntBASIC4.28□□□□□ -1.72
CD40P25942 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.28□□□□□ -1.72
CD40P25942 AL450023.3-201ENST00000440592 271 ntBASIC4.28□□□□□ -1.72
CD40P25942 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.28□□□□□ -1.72
CD40P25942 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.28□□□□□ -1.72
CD40P25942 SCARNA18-201ENST00000459004 134 ntBASIC4.28□□□□□ -1.72
CD40P25942 AC116533.1-201ENST00000459748 321 ntBASIC4.28□□□□□ -1.72
CD40P25942 AC108860.1-201ENST00000484521 383 ntBASIC4.28□□□□□ -1.72
CD40P25942 AL049874.2-201ENST00000492636 288 ntBASIC4.28□□□□□ -1.72
CD40P25942 Y_RNA.654-201ENST00000497848 106 ntBASIC4.28□□□□□ -1.72
CD40P25942 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.28□□□□□ -1.72
CD40P25942 RNU6-677P-201ENST00000516914 101 ntBASIC4.28□□□□□ -1.72
CD40P25942 RN7SKP258-201ENST00000517151 304 ntBASIC4.28□□□□□ -1.72
CD40P25942 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.28□□□□□ -1.72
CD40P25942 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.28□□□□□ -1.72
CD40P25942 AL355375.2-201ENST00000574825 175 ntBASIC4.28□□□□□ -1.72
CD40P25942 MIR3667-201ENST00000581025 74 ntBASIC4.28□□□□□ -1.72
CD40P25942 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.28□□□□□ -1.72
CD40P25942 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.28□□□□□ -1.72
CD40P25942 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.28□□□□□ -1.72
CD40P25942 AC020910.3-201ENST00000603701 874 ntBASIC4.28□□□□□ -1.72
CD40P25942 AL138889.2-201ENST00000603883 242 ntBASIC4.28□□□□□ -1.72
CD40P25942 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.28□□□□□ -1.72
CD40P25942 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.28□□□□□ -1.72
CD40P25942 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD40P25942 AC063976.2-201ENST00000425667 3556 ntBASIC4.28□□□□□ -1.72
CD40P25942 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD40P25942 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD40P25942 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.28□□□□□ -1.72
CD40P25942 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD40P25942 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.28□□□□□ -1.72
CD40P25942 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms