Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNU6-332P-201ENST00000391193 108 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 AL359634.1-202ENST00000404721 284 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 NDUFS5P1-201ENST00000405668 289 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.6□□□□□ -1.51
ERCC3P19447 PPP1R11P2-201ENST00000423543 382 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.6□□□□□ -1.51
ERCC3P19447 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.6□□□□□ -1.51
ERCC3P19447 RPL7AP61-201ENST00000443410 636 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.6□□□□□ -1.51
ERCC3P19447 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.6□□□□□ -1.51
ERCC3P19447 AL691482.1-201ENST00000453255 87 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 AL591473.1-201ENST00000464297 313 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 RPS23P7-201ENST00000466210 444 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 AC026979.1-201ENST00000492525 396 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 AC083829.1-201ENST00000503756 657 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 SCARNA22-201ENST00000503991 125 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC3P19447 AC108078.2-201ENST00000510750 236 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 RNU4-29P-201ENST00000515943 174 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.6□□□□□ -1.51
ERCC3P19447 AC068831.4-201ENST00000556118 109 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.6□□□□□ -1.51
ERCC3P19447 FAM60BP-201ENST00000578364 658 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.6□□□□□ -1.51
ERCC3P19447 MIR4775-201ENST00000581168 75 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.6□□□□□ -1.51
ERCC3P19447 SNRPGP15-201ENST00000600149 222 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 FAM27B-201ENST00000610601 213 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 AP003122.6-201ENST00000623831 495 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.6□□□□□ -1.51
ERCC3P19447 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC3P19447 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ERCC3P19447 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC3P19447 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC3P19447 AL365440.1-201ENST00000436135 2167 ntBASIC5.6□□□□□ -1.51
ERCC3P19447 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.6□□□□□ -1.51
ERCC3P19447 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.6□□□□□ -1.51
ERCC3P19447 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ERCC3P19447 AP001273.1-201ENST00000624493 3152 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 AC092326.2-201ENST00000624772 1561 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ERCC3P19447 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.59□□□□□ -1.51
ERCC3P19447 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.59□□□□□ -1.51
ERCC3P19447 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
ERCC3P19447 Y_RNA.157-201ENST00000363638 102 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 RNU6-960P-201ENST00000364056 120 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 RNU4-66P-201ENST00000365199 138 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 SNORA70F-201ENST00000384142 135 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 AL356967.1-201ENST00000406305 431 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC3P19447 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC3P19447 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC3P19447 AC093019.1-201ENST00000443135 252 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 CBWD4P-201ENST00000445695 655 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 AC000111.2-201ENST00000448200 210 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC3P19447 RPS5P7-201ENST00000456664 608 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 RPL7L1P8-201ENST00000469911 741 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 AC010285.1-201ENST00000470580 392 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC3P19447 AC092436.1-201ENST00000506450 503 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 AC010486.1-201ENST00000511793 424 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 RNA5SP464-201ENST00000516251 108 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 SUMO2P20-201ENST00000520803 283 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 OR5B19P-201ENST00000531766 928 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC3P19447 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC3P19447 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.59□□□□□ -1.51
ERCC3P19447 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.59□□□□□ -1.51
ERCC3P19447 MIR4715-201ENST00000584117 79 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 MIR4275-201ENST00000636486 87 ntBASIC5.59□□□□□ -1.51
ERCC3P19447 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
ERCC3P19447 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
ERCC3P19447 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.59□□□□□ -1.52
ERCC3P19447 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
ERCC3P19447 API5P2-201ENST00000397055 1498 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC3P19447 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC3P19447 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ERCC3P19447 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
ERCC3P19447 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
ERCC3P19447 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
ERCC3P19447 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC3P19447 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
ERCC3P19447 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.58□□□□□ -1.52
ERCC3P19447 RPS23P10-201ENST00000416185 486 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 AC009161.1-201ENST00000417306 376 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 AC008850.1-201ENST00000427546 362 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.58□□□□□ -1.52
ERCC3P19447 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.58□□□□□ -1.52
ERCC3P19447 RPS17P2-201ENST00000461663 408 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 AP000852.1-201ENST00000472460 573 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 MTCO2P30-201ENST00000503662 364 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 AC104806.1-201ENST00000508720 308 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 IGKV2D-23-201ENST00000518179 286 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.58□□□□□ -1.52
ERCC3P19447 AC009643.1-201ENST00000532030 391 ntBASIC5.58□□□□□ -1.52
ERCC3P19447 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.58□□□□□ -1.52
ERCC3P19447 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms