Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 TBCAP2-201ENST00000416175 326 ntBASIC5.54□□□□□ -1.52
LIG1P18858 AL161631.1-201ENST00000417933 486 ntBASIC5.54□□□□□ -1.52
LIG1P18858 AF186996.5-201ENST00000418098 904 ntBASIC5.54□□□□□ -1.52
LIG1P18858 PRPF38AP2-201ENST00000438179 851 ntBASIC5.54□□□□□ -1.52
LIG1P18858 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.54□□□□□ -1.52
LIG1P18858 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.54□□□□□ -1.52
LIG1P18858 MTND5P22-201ENST00000458380 195 ntBASIC5.54□□□□□ -1.52
LIG1P18858 RPL35AP28-201ENST00000459730 331 ntBASIC5.54□□□□□ -1.52
LIG1P18858 RPL7L1P8-201ENST00000469911 741 ntBASIC5.54□□□□□ -1.52
LIG1P18858 VN1R17P-201ENST00000472048 1090 ntBASIC5.54□□□□□ -1.52
LIG1P18858 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.54□□□□□ -1.52
LIG1P18858 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.54□□□□□ -1.52
LIG1P18858 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.54□□□□□ -1.52
LIG1P18858 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.54□□□□□ -1.52
LIG1P18858 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.54□□□□□ -1.52
LIG1P18858 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LIG1P18858 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.54□□□□□ -1.52
LIG1P18858 AC006006.1-201ENST00000603082 144 ntBASIC5.54□□□□□ -1.52
LIG1P18858 AL022099.1-201ENST00000604551 712 ntBASIC5.54□□□□□ -1.52
LIG1P18858 APOOP1-201ENST00000604695 592 ntBASIC5.54□□□□□ -1.52
LIG1P18858 Mico1.1-201ENST00000611698 204 ntBASIC5.54□□□□□ -1.52
LIG1P18858 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.54□□□□□ -1.52
LIG1P18858 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIG1P18858 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.54□□□□□ -1.52
LIG1P18858 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.54□□□□□ -1.52
LIG1P18858 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LIG1P18858 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.54□□□□□ -1.52
LIG1P18858 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.53□□□□□ -1.52
LIG1P18858 AC009902.3-201ENST00000606235 2172 ntBASIC5.53□□□□□ -1.52
LIG1P18858 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.53□□□□□ -1.52
LIG1P18858 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LIG1P18858 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.53□□□□□ -1.52
LIG1P18858 TLK1P1-201ENST00000456760 2440 ntBASIC5.53□□□□□ -1.52
LIG1P18858 OR1S2-201ENST00000302592 978 ntBASIC5.53□□□□□ -1.52
LIG1P18858 RNA5SP258-201ENST00000362750 119 ntBASIC5.53□□□□□ -1.52
LIG1P18858 RN7SKP103-201ENST00000363848 320 ntBASIC5.53□□□□□ -1.52
LIG1P18858 Y_RNA.197-201ENST00000364004 102 ntBASIC5.53□□□□□ -1.52
LIG1P18858 RNU4-66P-201ENST00000365199 138 ntBASIC5.53□□□□□ -1.52
LIG1P18858 Y_RNA.373-201ENST00000365600 103 ntBASIC5.53□□□□□ -1.52
LIG1P18858 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.53□□□□□ -1.52
LIG1P18858 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIG1P18858 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.53□□□□□ -1.52
LIG1P18858 RNU6-1013P-201ENST00000384180 107 ntBASIC5.53□□□□□ -1.52
LIG1P18858 RNU6-39P-201ENST00000384344 107 ntBASIC5.53□□□□□ -1.52
LIG1P18858 RNU6-1105P-201ENST00000384774 107 ntBASIC5.53□□□□□ -1.52
LIG1P18858 AC016769.2-201ENST00000414815 475 ntBASIC5.53□□□□□ -1.52
LIG1P18858 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.53□□□□□ -1.52
LIG1P18858 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.53□□□□□ -1.52
LIG1P18858 ARL5AP1-201ENST00000418991 388 ntBASIC5.53□□□□□ -1.52
LIG1P18858 AC004938.1-201ENST00000438468 308 ntBASIC5.53□□□□□ -1.52
LIG1P18858 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.53□□□□□ -1.52
LIG1P18858 snoU13.8-201ENST00000458890 104 ntBASIC5.53□□□□□ -1.52
LIG1P18858 RPS4XP10-201ENST00000465034 731 ntBASIC5.53□□□□□ -1.52
LIG1P18858 AC140172.1-201ENST00000502928 141 ntBASIC5.53□□□□□ -1.52
LIG1P18858 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.53□□□□□ -1.52
LIG1P18858 RNU6-864P-201ENST00000516256 108 ntBASIC5.53□□□□□ -1.52
LIG1P18858 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.53□□□□□ -1.52
LIG1P18858 AP005435.4-201ENST00000529514 284 ntBASIC5.53□□□□□ -1.52
LIG1P18858 AC018630.1-201ENST00000541376 925 ntBASIC5.53□□□□□ -1.52
LIG1P18858 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.53□□□□□ -1.52
LIG1P18858 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.53□□□□□ -1.52
LIG1P18858 DNAJC8P1-201ENST00000554535 372 ntBASIC5.53□□□□□ -1.52
LIG1P18858 AL161713.1-201ENST00000555538 145 ntBASIC5.53□□□□□ -1.52
LIG1P18858 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.53□□□□□ -1.52
LIG1P18858 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.53□□□□□ -1.52
LIG1P18858 AC090615.1-201ENST00000577519 154 ntBASIC5.53□□□□□ -1.52
LIG1P18858 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.53□□□□□ -1.52
LIG1P18858 AC019193.3-201ENST00000609144 554 ntBASIC5.53□□□□□ -1.52
LIG1P18858 AL713922.2-201ENST00000619384 716 ntBASIC5.53□□□□□ -1.52
LIG1P18858 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.53□□□□□ -1.52
LIG1P18858 AL159972.1-201ENST00000625150 448 ntBASIC5.53□□□□□ -1.52
LIG1P18858 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIG1P18858 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LIG1P18858 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIG1P18858 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LIG1P18858 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LIG1P18858 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIG1P18858 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.52□□□□□ -1.53
LIG1P18858 AC012618.3-205ENST00000637896 1496 ntBASIC5.52□□□□□ -1.53
LIG1P18858 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
LIG1P18858 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIG1P18858 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIG1P18858 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIG1P18858 HSPE1P11-201ENST00000339579 310 ntBASIC5.52□□□□□ -1.53
LIG1P18858 RN7SKP95-201ENST00000362860 303 ntBASIC5.52□□□□□ -1.53
LIG1P18858 RNU6-97P-201ENST00000363387 104 ntBASIC5.52□□□□□ -1.53
LIG1P18858 RNU5E-8P-201ENST00000363502 116 ntBASIC5.52□□□□□ -1.53
LIG1P18858 MIR558-201ENST00000384920 94 ntBASIC5.52□□□□□ -1.53
LIG1P18858 MIR550A3-201ENST00000390735 95 ntBASIC5.52□□□□□ -1.53
LIG1P18858 RNU6-903P-201ENST00000391270 109 ntBASIC5.52□□□□□ -1.53
LIG1P18858 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIG1P18858 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LIG1P18858 RNU4-14P-201ENST00000410858 122 ntBASIC5.52□□□□□ -1.53
LIG1P18858 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.52□□□□□ -1.53
LIG1P18858 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.52□□□□□ -1.53
LIG1P18858 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.52□□□□□ -1.53
LIG1P18858 UBE2V1P13-201ENST00000436983 439 ntBASIC5.52□□□□□ -1.53
LIG1P18858 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.52□□□□□ -1.53
LIG1P18858 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.52□□□□□ -1.53
LIG1P18858 AP001992.1-205ENST00000462248 379 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms