Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATF4P18848 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATF4P18848 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATF4P18848 Y_RNA.33-201ENST00000362591 102 ntBASIC4.67□□□□□ -1.66
ATF4P18848 RNA5SP375-201ENST00000362975 119 ntBASIC4.67□□□□□ -1.66
ATF4P18848 RN7SKP15-201ENST00000364742 309 ntBASIC4.67□□□□□ -1.66
ATF4P18848 SNORD116-11-201ENST00000383882 92 ntBASIC4.67□□□□□ -1.66
ATF4P18848 RNU6-1297P-201ENST00000384415 104 ntBASIC4.67□□□□□ -1.66
ATF4P18848 MIR548K-201ENST00000408406 116 ntBASIC4.67□□□□□ -1.66
ATF4P18848 MIR548F5-201ENST00000408421 86 ntBASIC4.67□□□□□ -1.66
ATF4P18848 RPL37P10-201ENST00000412884 288 ntBASIC4.67□□□□□ -1.66
ATF4P18848 AC245096.1-201ENST00000413104 546 ntBASIC4.67□□□□□ -1.66
ATF4P18848 MRPL53P1-201ENST00000414323 319 ntBASIC4.67□□□□□ -1.66
ATF4P18848 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.67□□□□□ -1.66
ATF4P18848 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
ATF4P18848 FABP7P2-201ENST00000429946 379 ntBASIC4.67□□□□□ -1.66
ATF4P18848 PIGFP3-201ENST00000441918 722 ntBASIC4.67□□□□□ -1.66
ATF4P18848 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.67□□□□□ -1.66
ATF4P18848 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
ATF4P18848 MTND4P17-201ENST00000470444 350 ntBASIC4.67□□□□□ -1.66
ATF4P18848 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
ATF4P18848 RPL23AP40-201ENST00000487630 390 ntBASIC4.67□□□□□ -1.66
ATF4P18848 AC083829.1-201ENST00000503756 657 ntBASIC4.67□□□□□ -1.66
ATF4P18848 AC009901.1-201ENST00000506703 541 ntBASIC4.67□□□□□ -1.66
ATF4P18848 RNU6-559P-201ENST00000516151 98 ntBASIC4.67□□□□□ -1.66
ATF4P18848 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.67□□□□□ -1.66
ATF4P18848 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.67□□□□□ -1.66
ATF4P18848 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.67□□□□□ -1.66
ATF4P18848 AP001858.2-201ENST00000536213 601 ntBASIC4.67□□□□□ -1.66
ATF4P18848 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.67□□□□□ -1.66
ATF4P18848 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.67□□□□□ -1.66
ATF4P18848 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.67□□□□□ -1.66
ATF4P18848 DYNLL1P4-201ENST00000549314 266 ntBASIC4.67□□□□□ -1.66
ATF4P18848 AL049839.1-201ENST00000556151 657 ntBASIC4.67□□□□□ -1.66
ATF4P18848 OR1E3-201ENST00000575608 948 ntBASIC4.67□□□□□ -1.66
ATF4P18848 MIR3690-201ENST00000580266 75 ntBASIC4.67□□□□□ -1.66
ATF4P18848 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.67□□□□□ -1.66
ATF4P18848 AC008555.7-201ENST00000605008 583 ntBASIC4.67□□□□□ -1.66
ATF4P18848 AC007742.2-201ENST00000618226 398 ntBASIC4.67□□□□□ -1.66
ATF4P18848 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.67□□□□□ -1.66
ATF4P18848 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ATF4P18848 OR52H1-202ENST00000641796 1061 ntBASIC4.67□□□□□ -1.66
ATF4P18848 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
ATF4P18848 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.67□□□□□ -1.66
ATF4P18848 AP000542.2-201ENST00000623199 6179 ntBASIC4.67□□□□□ -1.66
ATF4P18848 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.67□□□□□ -1.66
ATF4P18848 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATF4P18848 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATF4P18848 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ATF4P18848 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.67□□□□□ -1.66
ATF4P18848 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ATF4P18848 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ATF4P18848 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.67□□□□□ -1.66
ATF4P18848 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
ATF4P18848 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.66□□□□□ -1.66
ATF4P18848 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATF4P18848 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATF4P18848 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
ATF4P18848 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATF4P18848 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ATF4P18848 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.66□□□□□ -1.66
ATF4P18848 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
ATF4P18848 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ATF4P18848 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.66□□□□□ -1.66
ATF4P18848 RNA5SP346-201ENST00000363541 121 ntBASIC4.66□□□□□ -1.66
ATF4P18848 RNA5SP433-201ENST00000364491 114 ntBASIC4.66□□□□□ -1.66
ATF4P18848 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.66□□□□□ -1.66
ATF4P18848 RNU6-1179P-201ENST00000384667 107 ntBASIC4.66□□□□□ -1.66
ATF4P18848 MIR578-201ENST00000384828 96 ntBASIC4.66□□□□□ -1.66
ATF4P18848 MIR1302-11-201ENST00000408051 138 ntBASIC4.66□□□□□ -1.66
ATF4P18848 MIR1302-9-201ENST00000408365 138 ntBASIC4.66□□□□□ -1.66
ATF4P18848 MIR1302-10-201ENST00000408734 138 ntBASIC4.66□□□□□ -1.66
ATF4P18848 RNA5SP156-201ENST00000410250 110 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.66□□□□□ -1.66
ATF4P18848 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.66□□□□□ -1.66
ATF4P18848 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.66□□□□□ -1.66
ATF4P18848 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.66□□□□□ -1.66
ATF4P18848 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.66□□□□□ -1.66
ATF4P18848 AC007679.3-201ENST00000434035 414 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.66□□□□□ -1.66
ATF4P18848 AL645936.1-201ENST00000441979 518 ntBASIC4.66□□□□□ -1.66
ATF4P18848 RPS24P13-201ENST00000442520 397 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AC144530.1-201ENST00000452862 555 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AC009963.3-201ENST00000458090 486 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AC005532.2-201ENST00000467154 373 ntBASIC4.66□□□□□ -1.66
ATF4P18848 KC877373.1-201ENST00000479066 408 ntBASIC4.66□□□□□ -1.66
ATF4P18848 CEACAMP10-202ENST00000495431 496 ntBASIC4.66□□□□□ -1.66
ATF4P18848 SUMO2P6-201ENST00000505273 288 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.66□□□□□ -1.66
ATF4P18848 RN7SKP24-201ENST00000515888 284 ntBASIC4.66□□□□□ -1.66
ATF4P18848 RN7SKP288-201ENST00000516227 268 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.66□□□□□ -1.66
ATF4P18848 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.66□□□□□ -1.66
ATF4P18848 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.66□□□□□ -1.66
ATF4P18848 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.66□□□□□ -1.66
ATF4P18848 HPRT1P3-201ENST00000539521 576 ntBASIC4.66□□□□□ -1.66
ATF4P18848 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.66□□□□□ -1.66
ATF4P18848 AL442663.2-201ENST00000554385 511 ntBASIC4.66□□□□□ -1.66
ATF4P18848 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms