Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VIMP08670 AL356274.2-201ENST00000624379 3752 ntBASIC3.41□□□□□ -1.86
VIMP08670 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.41□□□□□ -1.86
VIMP08670 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VIMP08670 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.41□□□□□ -1.86
VIMP08670 MTND5P7-201ENST00000413558 1798 ntBASIC3.4□□□□□ -1.86
VIMP08670 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.4□□□□□ -1.86
VIMP08670 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.4□□□□□ -1.86
VIMP08670 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.4□□□□□ -1.86
VIMP08670 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
VIMP08670 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.4□□□□□ -1.86
VIMP08670 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.4□□□□□ -1.86
VIMP08670 RNU6-462P-201ENST00000362659 105 ntBASIC3.4□□□□□ -1.87
VIMP08670 RNU6-97P-201ENST00000363387 104 ntBASIC3.4□□□□□ -1.87
VIMP08670 RNU6-931P-201ENST00000363850 107 ntBASIC3.4□□□□□ -1.87
VIMP08670 RNU6-744P-201ENST00000365557 107 ntBASIC3.4□□□□□ -1.87
VIMP08670 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VIMP08670 RNU6-213P-201ENST00000384051 104 ntBASIC3.4□□□□□ -1.87
VIMP08670 RNU6-1316P-201ENST00000384242 108 ntBASIC3.4□□□□□ -1.87
VIMP08670 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
VIMP08670 RSL24D1P4-201ENST00000400938 484 ntBASIC3.4□□□□□ -1.87
VIMP08670 RPS3AP24-201ENST00000407896 734 ntBASIC3.4□□□□□ -1.87
VIMP08670 Z99755.1-201ENST00000414048 380 ntBASIC3.4□□□□□ -1.87
VIMP08670 RPL32P35-201ENST00000415214 394 ntBASIC3.4□□□□□ -1.87
VIMP08670 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.4□□□□□ -1.87
VIMP08670 CCDC58P2-201ENST00000417131 366 ntBASIC3.4□□□□□ -1.87
VIMP08670 AC083875.1-201ENST00000419509 405 ntBASIC3.4□□□□□ -1.87
VIMP08670 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.4□□□□□ -1.87
VIMP08670 AC093151.1-201ENST00000427711 313 ntBASIC3.4□□□□□ -1.87
VIMP08670 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.4□□□□□ -1.87
VIMP08670 MTCYBP34-201ENST00000439552 670 ntBASIC3.4□□□□□ -1.87
VIMP08670 GAPDHP27-201ENST00000447427 1020 ntBASIC3.4□□□□□ -1.87
VIMP08670 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.4□□□□□ -1.87
VIMP08670 PAXBP1P1-201ENST00000449315 447 ntBASIC3.4□□□□□ -1.87
VIMP08670 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.4□□□□□ -1.87
VIMP08670 RPL23AP35-201ENST00000451906 501 ntBASIC3.4□□□□□ -1.87
VIMP08670 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.4□□□□□ -1.87
VIMP08670 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.4□□□□□ -1.87
VIMP08670 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.4□□□□□ -1.87
VIMP08670 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.4□□□□□ -1.87
VIMP08670 AC068724.1-201ENST00000487100 792 ntBASIC3.4□□□□□ -1.87
VIMP08670 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.4□□□□□ -1.87
VIMP08670 ARL4AP2-201ENST00000507378 601 ntBASIC3.4□□□□□ -1.87
VIMP08670 AC087359.1-201ENST00000508335 1740 ntBASIC3.4□□□□□ -1.87
VIMP08670 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.4□□□□□ -1.87
VIMP08670 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.4□□□□□ -1.87
VIMP08670 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
VIMP08670 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.4□□□□□ -1.87
VIMP08670 MTCO1P35-201ENST00000515270 228 ntBASIC3.4□□□□□ -1.87
VIMP08670 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.4□□□□□ -1.87
VIMP08670 RNA5SP217-201ENST00000515959 91 ntBASIC3.4□□□□□ -1.87
VIMP08670 RNU1-143P-201ENST00000516296 146 ntBASIC3.4□□□□□ -1.87
VIMP08670 SNORA31.26-201ENST00000517250 137 ntBASIC3.4□□□□□ -1.87
VIMP08670 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.4□□□□□ -1.87
VIMP08670 UBTFL10-201ENST00000528532 562 ntBASIC3.4□□□□□ -1.87
VIMP08670 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.4□□□□□ -1.87
VIMP08670 AC025884.1-201ENST00000556034 378 ntBASIC3.4□□□□□ -1.87
VIMP08670 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.4□□□□□ -1.87
VIMP08670 HSPE1P5-201ENST00000561489 272 ntBASIC3.4□□□□□ -1.87
VIMP08670 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.4□□□□□ -1.87
VIMP08670 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.4□□□□□ -1.87
VIMP08670 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.4□□□□□ -1.87
VIMP08670 AC020914.6-201ENST00000594327 272 ntBASIC3.4□□□□□ -1.87
VIMP08670 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.4□□□□□ -1.87
VIMP08670 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.4□□□□□ -1.87
VIMP08670 RNU1-30P-201ENST00000606575 163 ntBASIC3.4□□□□□ -1.87
VIMP08670 BX323046.1-201ENST00000610145 535 ntBASIC3.4□□□□□ -1.87
VIMP08670 U1.23-201ENST00000610293 146 ntBASIC3.4□□□□□ -1.87
VIMP08670 RNU1-68P-201ENST00000615382 146 ntBASIC3.4□□□□□ -1.87
VIMP08670 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VIMP08670 U1.39-201ENST00000621562 146 ntBASIC3.4□□□□□ -1.87
VIMP08670 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VIMP08670 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VIMP08670 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VIMP08670 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.39□□□□□ -1.87
VIMP08670 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.39□□□□□ -1.87
VIMP08670 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
VIMP08670 SNORA51.4-201ENST00000364993 124 ntBASIC3.39□□□□□ -1.87
VIMP08670 AL356421.1-201ENST00000403255 413 ntBASIC3.39□□□□□ -1.87
VIMP08670 U3.42-201ENST00000408746 214 ntBASIC3.39□□□□□ -1.87
VIMP08670 RPS3AP25-201ENST00000411660 793 ntBASIC3.39□□□□□ -1.87
VIMP08670 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.39□□□□□ -1.87
VIMP08670 HIGD1AP15-201ENST00000416198 280 ntBASIC3.39□□□□□ -1.87
VIMP08670 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.39□□□□□ -1.87
VIMP08670 RPL21P32-201ENST00000419877 477 ntBASIC3.39□□□□□ -1.87
VIMP08670 XKRYP1-201ENST00000423438 492 ntBASIC3.39□□□□□ -1.87
VIMP08670 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.39□□□□□ -1.87
VIMP08670 MTATP6P4-201ENST00000427725 675 ntBASIC3.39□□□□□ -1.87
VIMP08670 OR4K11P-201ENST00000431829 904 ntBASIC3.39□□□□□ -1.87
VIMP08670 XKRYP2-201ENST00000432915 492 ntBASIC3.39□□□□□ -1.87
VIMP08670 SETP8-201ENST00000435341 628 ntBASIC3.39□□□□□ -1.87
VIMP08670 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.39□□□□□ -1.87
VIMP08670 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.39□□□□□ -1.87
VIMP08670 MTCO1P27-201ENST00000448269 226 ntBASIC3.39□□□□□ -1.87
VIMP08670 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.39□□□□□ -1.87
VIMP08670 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.39□□□□□ -1.87
VIMP08670 SNORD121B-201ENST00000458838 81 ntBASIC3.39□□□□□ -1.87
VIMP08670 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.39□□□□□ -1.87
VIMP08670 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.39□□□□□ -1.87
VIMP08670 VN1R104P-201ENST00000505115 1009 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms