Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.97□□□□□ -1.77
MMP3P08254 U3.44-201ENST00000458938 192 ntBASIC3.97□□□□□ -1.77
MMP3P08254 AC010469.1-201ENST00000463864 576 ntBASIC3.97□□□□□ -1.77
MMP3P08254 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.97□□□□□ -1.77
MMP3P08254 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.97□□□□□ -1.77
MMP3P08254 RNA5SP154-201ENST00000516193 111 ntBASIC3.97□□□□□ -1.77
MMP3P08254 RN7SKP209-201ENST00000516888 304 ntBASIC3.97□□□□□ -1.77
MMP3P08254 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.97□□□□□ -1.77
MMP3P08254 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.97□□□□□ -1.77
MMP3P08254 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.97□□□□□ -1.77
MMP3P08254 AC022861.1-201ENST00000522981 663 ntBASIC3.97□□□□□ -1.77
MMP3P08254 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.97□□□□□ -1.77
MMP3P08254 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.97□□□□□ -1.77
MMP3P08254 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.97□□□□□ -1.77
MMP3P08254 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.97□□□□□ -1.77
MMP3P08254 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.97□□□□□ -1.77
MMP3P08254 AC011611.1-201ENST00000552179 197 ntBASIC3.97□□□□□ -1.77
MMP3P08254 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
MMP3P08254 AC067852.4-201ENST00000590314 478 ntBASIC3.97□□□□□ -1.77
MMP3P08254 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.97□□□□□ -1.77
MMP3P08254 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.97□□□□□ -1.77
MMP3P08254 AC015871.2-201ENST00000603605 948 ntBASIC3.97□□□□□ -1.77
MMP3P08254 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
MMP3P08254 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.97□□□□□ -1.77
MMP3P08254 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
MMP3P08254 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
MMP3P08254 AC008725.1-201ENST00000605123 2263 ntBASIC3.96□□□□□ -1.78
MMP3P08254 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MMP3P08254 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.96□□□□□ -1.78
MMP3P08254 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
MMP3P08254 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
MMP3P08254 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MMP3P08254 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
MMP3P08254 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.96□□□□□ -1.78
MMP3P08254 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MMP3P08254 RAC1P3-201ENST00000416129 580 ntBASIC3.96□□□□□ -1.78
MMP3P08254 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.96□□□□□ -1.78
MMP3P08254 FNDC3CP-201ENST00000420795 1155 ntBASIC3.96□□□□□ -1.78
MMP3P08254 GLRXP1-201ENST00000423261 334 ntBASIC3.96□□□□□ -1.78
MMP3P08254 AC017083.1-201ENST00000428093 483 ntBASIC3.96□□□□□ -1.78
MMP3P08254 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.96□□□□□ -1.78
MMP3P08254 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.96□□□□□ -1.78
MMP3P08254 RPS24P1-201ENST00000438550 371 ntBASIC3.96□□□□□ -1.78
MMP3P08254 AC127537.2-201ENST00000439258 465 ntBASIC3.96□□□□□ -1.78
MMP3P08254 AL022238.1-201ENST00000442557 355 ntBASIC3.96□□□□□ -1.78
MMP3P08254 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.96□□□□□ -1.78
MMP3P08254 ARPC3P5-201ENST00000448802 534 ntBASIC3.96□□□□□ -1.78
MMP3P08254 PAXBP1P1-201ENST00000449315 447 ntBASIC3.96□□□□□ -1.78
MMP3P08254 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.96□□□□□ -1.78
MMP3P08254 RNF138P1-201ENST00000502765 546 ntBASIC3.96□□□□□ -1.78
MMP3P08254 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
MMP3P08254 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
MMP3P08254 POU5F1P7-201ENST00000508759 541 ntBASIC3.96□□□□□ -1.78
MMP3P08254 AC005798.1-201ENST00000513715 387 ntBASIC3.96□□□□□ -1.78
MMP3P08254 HIGD1AP3-201ENST00000515857 278 ntBASIC3.96□□□□□ -1.78
MMP3P08254 RN7SKP57-201ENST00000517248 293 ntBASIC3.96□□□□□ -1.78
MMP3P08254 MYL12AP1-201ENST00000518490 515 ntBASIC3.96□□□□□ -1.78
MMP3P08254 IGHV3-32-201ENST00000519182 355 ntBASIC3.96□□□□□ -1.78
MMP3P08254 AP002963.1-201ENST00000530590 184 ntBASIC3.96□□□□□ -1.78
MMP3P08254 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.96□□□□□ -1.78
MMP3P08254 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.96□□□□□ -1.78
MMP3P08254 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.96□□□□□ -1.78
MMP3P08254 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.96□□□□□ -1.78
MMP3P08254 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.96□□□□□ -1.78
MMP3P08254 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.96□□□□□ -1.78
MMP3P08254 AC087683.1-201ENST00000591187 441 ntBASIC3.96□□□□□ -1.78
MMP3P08254 AC025946.2-201ENST00000603398 234 ntBASIC3.96□□□□□ -1.78
MMP3P08254 BCRP9-201ENST00000605312 388 ntBASIC3.96□□□□□ -1.78
MMP3P08254 AC090186.1-201ENST00000605991 572 ntBASIC3.96□□□□□ -1.78
MMP3P08254 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.96□□□□□ -1.78
MMP3P08254 AC100793.4-201ENST00000613683 429 ntBASIC3.96□□□□□ -1.78
MMP3P08254 AL136964.1-201ENST00000622038 2990 ntBASIC3.96□□□□□ -1.78
MMP3P08254 AP003355.3-201ENST00000623465 114 ntBASIC3.96□□□□□ -1.78
MMP3P08254 AC093591.3-201ENST00000634516 308 ntBASIC3.96□□□□□ -1.78
MMP3P08254 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
MMP3P08254 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.95□□□□□ -1.78
MMP3P08254 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.95□□□□□ -1.78
MMP3P08254 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.95□□□□□ -1.78
MMP3P08254 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.95□□□□□ -1.78
MMP3P08254 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MMP3P08254 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MMP3P08254 AC007656.2-201ENST00000624902 4547 ntBASIC3.95□□□□□ -1.78
MMP3P08254 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MMP3P08254 RNU5E-5P-201ENST00000365379 116 ntBASIC3.95□□□□□ -1.78
MMP3P08254 Y_RNA.517-201ENST00000384551 106 ntBASIC3.95□□□□□ -1.78
MMP3P08254 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.95□□□□□ -1.78
MMP3P08254 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.95□□□□□ -1.78
MMP3P08254 OFD1P18Y-201ENST00000420889 959 ntBASIC3.95□□□□□ -1.78
MMP3P08254 RPL23AP74-201ENST00000437246 471 ntBASIC3.95□□□□□ -1.78
MMP3P08254 RSU1P2-202ENST00000437884 485 ntBASIC3.95□□□□□ -1.78
MMP3P08254 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MMP3P08254 AC115115.1-201ENST00000449927 248 ntBASIC3.95□□□□□ -1.78
MMP3P08254 RNA5SP269-201ENST00000459032 137 ntBASIC3.95□□□□□ -1.78
MMP3P08254 RPS29P2-201ENST00000479278 136 ntBASIC3.95□□□□□ -1.78
MMP3P08254 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.95□□□□□ -1.78
MMP3P08254 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.95□□□□□ -1.78
MMP3P08254 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.95□□□□□ -1.78
MMP3P08254 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.95□□□□□ -1.78
MMP3P08254 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.95□□□□□ -1.78
MMP3P08254 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms