Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.27□□□□□ -1.73
RHOP08100 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.27□□□□□ -1.73
RHOP08100 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.27□□□□□ -1.73
RHOP08100 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.27□□□□□ -1.73
RHOP08100 AC090616.5-202ENST00000582111 297 ntBASIC4.27□□□□□ -1.73
RHOP08100 AC008752.3-201ENST00000588113 712 ntBASIC4.27□□□□□ -1.73
RHOP08100 AC060780.3-201ENST00000589464 80 ntBASIC4.27□□□□□ -1.73
RHOP08100 AC112230.1-201ENST00000604342 547 ntBASIC4.27□□□□□ -1.73
RHOP08100 OR10AB1P-201ENST00000609613 938 ntBASIC4.27□□□□□ -1.73
RHOP08100 MIR6868-201ENST00000611215 58 ntBASIC4.27□□□□□ -1.73
RHOP08100 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RHOP08100 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.27□□□□□ -1.73
RHOP08100 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.27□□□□□ -1.73
RHOP08100 AC009268.2-201ENST00000621925 457 ntBASIC4.27□□□□□ -1.73
RHOP08100 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.27□□□□□ -1.73
RHOP08100 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RHOP08100 Z82217.1-201ENST00000625157 8149 ntBASIC4.27□□□□□ -1.73
RHOP08100 AL139811.1-201ENST00000424779 2299 ntBASIC4.26□□□□□ -1.73
RHOP08100 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
RHOP08100 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.26□□□□□ -1.73
RHOP08100 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RHOP08100 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHOP08100 RNU6-28P-201ENST00000362378 107 ntBASIC4.26□□□□□ -1.73
RHOP08100 RNU6-694P-201ENST00000364071 147 ntBASIC4.26□□□□□ -1.73
RHOP08100 RNU6-213P-201ENST00000384051 104 ntBASIC4.26□□□□□ -1.73
RHOP08100 RNU6-878P-201ENST00000384578 110 ntBASIC4.26□□□□□ -1.73
RHOP08100 MIR23A-201ENST00000385245 73 ntBASIC4.26□□□□□ -1.73
RHOP08100 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.26□□□□□ -1.73
RHOP08100 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.26□□□□□ -1.73
RHOP08100 USP9YP27-201ENST00000418455 438 ntBASIC4.26□□□□□ -1.73
RHOP08100 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.26□□□□□ -1.73
RHOP08100 MTND4P28-201ENST00000426217 387 ntBASIC4.26□□□□□ -1.73
RHOP08100 AC006946.1-201ENST00000429106 328 ntBASIC4.26□□□□□ -1.73
RHOP08100 AL590233.1-201ENST00000430017 456 ntBASIC4.26□□□□□ -1.73
RHOP08100 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.26□□□□□ -1.73
RHOP08100 FCF1P1-201ENST00000432690 571 ntBASIC4.26□□□□□ -1.73
RHOP08100 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.26□□□□□ -1.73
RHOP08100 GOT2P5-201ENST00000433995 546 ntBASIC4.26□□□□□ -1.73
RHOP08100 AC104850.1-201ENST00000435940 476 ntBASIC4.26□□□□□ -1.73
RHOP08100 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.26□□□□□ -1.73
RHOP08100 MTND4LP16-201ENST00000440828 295 ntBASIC4.26□□□□□ -1.73
RHOP08100 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.26□□□□□ -1.73
RHOP08100 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RHOP08100 AL136380.1-201ENST00000447970 162 ntBASIC4.26□□□□□ -1.73
RHOP08100 AL500522.2-201ENST00000448562 343 ntBASIC4.26□□□□□ -1.73
RHOP08100 RPS20P32-201ENST00000456044 356 ntBASIC4.26□□□□□ -1.73
RHOP08100 AC012158.1-204ENST00000483430 465 ntBASIC4.26□□□□□ -1.73
RHOP08100 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.26□□□□□ -1.73
RHOP08100 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.26□□□□□ -1.73
RHOP08100 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.26□□□□□ -1.73
RHOP08100 Vault.3-201ENST00000516676 95 ntBASIC4.26□□□□□ -1.73
RHOP08100 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.26□□□□□ -1.73
RHOP08100 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.26□□□□□ -1.73
RHOP08100 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.26□□□□□ -1.73
RHOP08100 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.26□□□□□ -1.73
RHOP08100 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.26□□□□□ -1.73
RHOP08100 AL512360.1-201ENST00000555346 234 ntBASIC4.26□□□□□ -1.73
RHOP08100 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.26□□□□□ -1.73
RHOP08100 AC124068.1-201ENST00000563131 678 ntBASIC4.26□□□□□ -1.73
RHOP08100 AC025678.1-201ENST00000567861 338 ntBASIC4.26□□□□□ -1.73
RHOP08100 AC115621.1-201ENST00000604653 858 ntBASIC4.26□□□□□ -1.73
RHOP08100 AL365503.1-201ENST00000605247 905 ntBASIC4.26□□□□□ -1.73
RHOP08100 AP001330.5-201ENST00000607176 411 ntBASIC4.26□□□□□ -1.73
RHOP08100 SNORD91B-202ENST00000608459 222 ntBASIC4.26□□□□□ -1.73
RHOP08100 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.26□□□□□ -1.73
RHOP08100 AC140113.4-201ENST00000622087 222 ntBASIC4.26□□□□□ -1.73
RHOP08100 AP005264.7-201ENST00000625003 745 ntBASIC4.26□□□□□ -1.73
RHOP08100 AC099654.5-201ENST00000636479 350 ntBASIC4.26□□□□□ -1.73
RHOP08100 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RHOP08100 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RHOP08100 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHOP08100 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.25□□□□□ -1.73
RHOP08100 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RHOP08100 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RHOP08100 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.25□□□□□ -1.73
RHOP08100 OR52B1P-201ENST00000316506 909 ntBASIC4.25□□□□□ -1.73
RHOP08100 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RHOP08100 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RHOP08100 SNORA71.3-201ENST00000362582 128 ntBASIC4.25□□□□□ -1.73
RHOP08100 RNU6-181P-201ENST00000363225 107 ntBASIC4.25□□□□□ -1.73
RHOP08100 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.25□□□□□ -1.73
RHOP08100 Y_RNA.295-201ENST00000364918 102 ntBASIC4.25□□□□□ -1.73
RHOP08100 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RHOP08100 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RHOP08100 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.25□□□□□ -1.73
RHOP08100 RPL31P1-201ENST00000398116 372 ntBASIC4.25□□□□□ -1.73
RHOP08100 MRPL42P2-201ENST00000403169 426 ntBASIC4.25□□□□□ -1.73
RHOP08100 BTBD10P2-201ENST00000404779 676 ntBASIC4.25□□□□□ -1.73
RHOP08100 AL603766.1-201ENST00000407763 664 ntBASIC4.25□□□□□ -1.73
RHOP08100 RPL31P2-201ENST00000413849 377 ntBASIC4.25□□□□□ -1.73
RHOP08100 RPL31P45-201ENST00000419532 356 ntBASIC4.25□□□□□ -1.73
RHOP08100 AC012065.2-201ENST00000421295 375 ntBASIC4.25□□□□□ -1.73
RHOP08100 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.25□□□□□ -1.73
RHOP08100 SDCBPP1-201ENST00000440192 890 ntBASIC4.25□□□□□ -1.73
RHOP08100 AL049734.2-201ENST00000441066 616 ntBASIC4.25□□□□□ -1.73
RHOP08100 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.25□□□□□ -1.73
RHOP08100 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.25□□□□□ -1.73
RHOP08100 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.25□□□□□ -1.73
RHOP08100 RPL36AP13-201ENST00000457490 317 ntBASIC4.25□□□□□ -1.73
RHOP08100 RPL7P15-201ENST00000461190 712 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms