Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AC007182.2-201ENST00000489251 402 ntBASIC5.08□□□□□ -1.6
APPP05067 OR5H5P-201ENST00000503164 928 ntBASIC5.08□□□□□ -1.6
APPP05067 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.08□□□□□ -1.6
APPP05067 AC074344.1-201ENST00000512823 224 ntBASIC5.08□□□□□ -1.6
APPP05067 NPM1P41-201ENST00000512920 831 ntBASIC5.08□□□□□ -1.6
APPP05067 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
APPP05067 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.08□□□□□ -1.6
APPP05067 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.08□□□□□ -1.6
APPP05067 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.08□□□□□ -1.6
APPP05067 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.08□□□□□ -1.6
APPP05067 AP000907.2-201ENST00000530827 353 ntBASIC5.08□□□□□ -1.6
APPP05067 PTP4A1P6-201ENST00000531034 478 ntBASIC5.08□□□□□ -1.6
APPP05067 SUB1P2-201ENST00000556401 297 ntBASIC5.08□□□□□ -1.6
APPP05067 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.08□□□□□ -1.6
APPP05067 AC067852.4-201ENST00000590314 478 ntBASIC5.08□□□□□ -1.6
APPP05067 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.08□□□□□ -1.6
APPP05067 AL357078.3-201ENST00000607528 618 ntBASIC5.08□□□□□ -1.6
APPP05067 AC104458.1-201ENST00000608243 463 ntBASIC5.08□□□□□ -1.6
APPP05067 FAM27D1-201ENST00000612308 341 ntBASIC5.08□□□□□ -1.6
APPP05067 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.08□□□□□ -1.6
APPP05067 U6.42-201ENST00000618440 107 ntBASIC5.08□□□□□ -1.6
APPP05067 AL596245.1-201ENST00000618994 362 ntBASIC5.08□□□□□ -1.6
APPP05067 CR381572.1-201ENST00000625098 102 ntBASIC5.08□□□□□ -1.6
APPP05067 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.08□□□□□ -1.6
APPP05067 AC099654.14-201ENST00000638599 341 ntBASIC5.08□□□□□ -1.6
APPP05067 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
APPP05067 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
APPP05067 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
APPP05067 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
APPP05067 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
APPP05067 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
APPP05067 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
APPP05067 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
APPP05067 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
APPP05067 RNU1-15P-201ENST00000353977 144 ntBASIC5.07□□□□□ -1.6
APPP05067 Y_RNA.38-201ENST00000362617 102 ntBASIC5.07□□□□□ -1.6
APPP05067 RNA5SP258-201ENST00000362750 119 ntBASIC5.07□□□□□ -1.6
APPP05067 RNU6-97P-201ENST00000363387 104 ntBASIC5.07□□□□□ -1.6
APPP05067 RNY4P14-201ENST00000363656 96 ntBASIC5.07□□□□□ -1.6
APPP05067 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
APPP05067 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.07□□□□□ -1.6
APPP05067 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.07□□□□□ -1.6
APPP05067 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.07□□□□□ -1.6
APPP05067 RSL24D1P6-201ENST00000426934 401 ntBASIC5.07□□□□□ -1.6
APPP05067 AL121601.2-201ENST00000438019 707 ntBASIC5.07□□□□□ -1.6
APPP05067 USP9YP15-201ENST00000442391 422 ntBASIC5.07□□□□□ -1.6
APPP05067 ABCF2P2-201ENST00000450549 296 ntBASIC5.07□□□□□ -1.6
APPP05067 AF213884.1-201ENST00000488102 463 ntBASIC5.07□□□□□ -1.6
APPP05067 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.07□□□□□ -1.6
APPP05067 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.07□□□□□ -1.6
APPP05067 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.07□□□□□ -1.6
APPP05067 MRPL49P2-201ENST00000521066 465 ntBASIC5.07□□□□□ -1.6
APPP05067 AC022616.3-201ENST00000523940 148 ntBASIC5.07□□□□□ -1.6
APPP05067 AP003730.1-201ENST00000524605 285 ntBASIC5.07□□□□□ -1.6
APPP05067 MTND1P35-201ENST00000526739 508 ntBASIC5.07□□□□□ -1.6
APPP05067 AL512360.1-201ENST00000555346 234 ntBASIC5.07□□□□□ -1.6
APPP05067 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.07□□□□□ -1.6
APPP05067 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.07□□□□□ -1.6
APPP05067 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.07□□□□□ -1.6
APPP05067 AL161729.3-201ENST00000603533 673 ntBASIC5.07□□□□□ -1.6
APPP05067 AL139395.1-201ENST00000603662 160 ntBASIC5.07□□□□□ -1.6
APPP05067 LARP7P1-201ENST00000605576 316 ntBASIC5.07□□□□□ -1.6
APPP05067 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.07□□□□□ -1.6
APPP05067 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.07□□□□□ -1.6
APPP05067 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
APPP05067 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
APPP05067 AC139792.3-201ENST00000623525 224 ntBASIC5.07□□□□□ -1.6
APPP05067 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
APPP05067 Z82217.1-201ENST00000625157 8149 ntBASIC5.06□□□□□ -1.6
APPP05067 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.06□□□□□ -1.6
APPP05067 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC5.06□□□□□ -1.6
APPP05067 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
APPP05067 RNU1-108P-201ENST00000362556 161 ntBASIC5.06□□□□□ -1.6
APPP05067 Y_RNA.70-201ENST00000362886 110 ntBASIC5.06□□□□□ -1.6
APPP05067 RNU6-534P-201ENST00000364877 106 ntBASIC5.06□□□□□ -1.6
APPP05067 RNU6-1103P-201ENST00000384150 107 ntBASIC5.06□□□□□ -1.6
APPP05067 Y_RNA.493-201ENST00000384422 102 ntBASIC5.06□□□□□ -1.6
APPP05067 RNU6-114P-201ENST00000384704 105 ntBASIC5.06□□□□□ -1.6
APPP05067 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.06□□□□□ -1.6
APPP05067 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.06□□□□□ -1.6
APPP05067 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.06□□□□□ -1.6
APPP05067 RBMY1KP-201ENST00000423480 476 ntBASIC5.06□□□□□ -1.6
APPP05067 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.06□□□□□ -1.6
APPP05067 NANOGP6-201ENST00000429190 847 ntBASIC5.06□□□□□ -1.6
APPP05067 AL138799.3-201ENST00000438968 350 ntBASIC5.06□□□□□ -1.6
APPP05067 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.06□□□□□ -1.6
APPP05067 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.06□□□□□ -1.6
APPP05067 AL451050.1-201ENST00000450126 415 ntBASIC5.06□□□□□ -1.6
APPP05067 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.06□□□□□ -1.6
APPP05067 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
APPP05067 Vault.3-201ENST00000516676 95 ntBASIC5.06□□□□□ -1.6
APPP05067 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.06□□□□□ -1.6
APPP05067 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.06□□□□□ -1.6
APPP05067 AC100770.1-201ENST00000532310 322 ntBASIC5.06□□□□□ -1.6
APPP05067 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.06□□□□□ -1.6
APPP05067 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.06□□□□□ -1.6
APPP05067 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.06□□□□□ -1.6
APPP05067 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.06□□□□□ -1.6
APPP05067 MIR4512-201ENST00000583257 77 ntBASIC5.06□□□□□ -1.6
APPP05067 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms