Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MIR3912-201ENST00000577566 105 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DPB1P04440 VN1R83P-201ENST00000595685 445 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AC245036.5-201ENST00000596330 847 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DPB1P04440 AL627309.6-201ENST00000606857 840 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AC023158.2-201ENST00000614876 543 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
HLA-DPB1P04440 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DPB1P04440 AC092650.2-201ENST00000619984 902 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AL590240.3-201ENST00000621416 943 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AC091953.5-201ENST00000622919 233 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 AC120349.2-201ENST00000625002 298 ntBASIC2.57□□□□□ -2
HLA-DPB1P04440 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DPB1P04440 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.56□□□□□ -2
HLA-DPB1P04440 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DPB1P04440 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
HLA-DPB1P04440 AC007256.1-201ENST00000392253 2765 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.56□□□□□ -2
HLA-DPB1P04440 Y_RNA.25-201ENST00000362528 102 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 RNU6-1074P-201ENST00000383995 104 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 SNORD51-201ENST00000384320 80 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 MIR591-201ENST00000385290 95 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 RPL5P18-201ENST00000406671 891 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 RN7SKP220-201ENST00000410611 288 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DPB1P04440 DUTP6-201ENST00000425573 462 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DPB1P04440 AC022018.1-201ENST00000430685 241 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 MTND4LP10-201ENST00000435146 291 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.56□□□□□ -2
HLA-DPB1P04440 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DPB1P04440 SLC31A1P1-201ENST00000451221 567 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 USP9YP34-201ENST00000453983 808 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 snoU109.4-201ENST00000458953 143 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 AC103975.1-201ENST00000482506 483 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DPB1P04440 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DPB1P04440 KLRA1P-201ENST00000503499 986 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 MTND3P3-201ENST00000505004 126 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 AC026427.2-201ENST00000506228 536 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 AC113420.1-201ENST00000507903 571 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 MTCYBP16-201ENST00000509187 1129 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DPB1P04440 MTCO2P32-201ENST00000514865 403 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 RNA5SP341-201ENST00000516261 117 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 RPL12P22-201ENST00000519073 490 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DPB1P04440 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DPB1P04440 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DPB1P04440 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DPB1P04440 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DPB1P04440 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DPB1P04440 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.56□□□□□ -2
HLA-DPB1P04440 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DPB1P04440 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DPB1P04440 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DPB1P04440 BNIP3P11-201ENST00000603878 563 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 AC069431.2-201ENST00000604149 1099 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 AC055876.5-201ENST00000605667 259 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 AC069545.1-201ENST00000605671 358 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DPB1P04440 AL162274.2-201ENST00000614406 332 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 ATP5A1P2-202ENST00000616464 443 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 AL355493.4-201ENST00000618530 292 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 AL360181.4-201ENST00000621752 134 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DPB1P04440 MTND4P34-201ENST00000572715 1371 ntBASIC2.56□□□□□ -2
HLA-DPB1P04440 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
HLA-DPB1P04440 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
HLA-DPB1P04440 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
HLA-DPB1P04440 FAM35BP-202ENST00000497389 3337 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DPB1P04440 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DPB1P04440 RNU6-216P-201ENST00000363282 104 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 SNORA9.2-201ENST00000365361 133 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 MIR506-201ENST00000384998 124 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 UBE2D3P2-201ENST00000424409 445 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DPB1P04440 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DPB1P04440 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DPB1P04440 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DPB1P04440 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DPB1P04440 RPS3AP12-201ENST00000443616 753 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DPB1P04440 RPL39P6-201ENST00000448289 150 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DPB1P04440 AC005297.2-201ENST00000450430 606 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DPB1P04440 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DPB1P04440 PNPLA4P1-201ENST00000458328 305 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AP001992.1-205ENST00000462248 379 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 RPS15AP17-201ENST00000470598 390 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AC117440.1-201ENST00000474107 571 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AC012181.1-201ENST00000479895 423 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AC069528.1-202ENST00000482888 637 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AC079203.1-201ENST00000487972 404 ntBASIC2.55□□□□□ -2
HLA-DPB1P04440 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DPB1P04440 AC107982.1-201ENST00000507171 1300 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms