Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.13□□□□□ -2.23
APOBP04114 HIGD1AP11-201ENST00000438361 280 ntBASIC1.13□□□□□ -2.23
APOBP04114 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
APOBP04114 MIR3670-2-201ENST00000582974 65 ntBASIC1.13□□□□□ -2.23
APOBP04114 MIR3670-1-201ENST00000584160 65 ntBASIC1.13□□□□□ -2.23
APOBP04114 MIR3670-3-201ENST00000584855 65 ntBASIC1.13□□□□□ -2.23
APOBP04114 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.13□□□□□ -2.23
APOBP04114 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
APOBP04114 MIR3670-4-201ENST00000612260 65 ntBASIC1.13□□□□□ -2.23
APOBP04114 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
APOBP04114 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.12□□□□□ -2.23
APOBP04114 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
APOBP04114 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.12□□□□□ -2.23
APOBP04114 AC034268.2-201ENST00000571784 482 ntBASIC1.12□□□□□ -2.23
APOBP04114 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.12□□□□□ -2.23
APOBP04114 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
APOBP04114 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
APOBP04114 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.12□□□□□ -2.23
APOBP04114 RNU6-174P-201ENST00000410406 106 ntBASIC1.12□□□□□ -2.23
APOBP04114 HMGN2P38-201ENST00000423806 265 ntBASIC1.12□□□□□ -2.23
APOBP04114 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.12□□□□□ -2.23
APOBP04114 AC244505.4-201ENST00000434905 287 ntBASIC1.12□□□□□ -2.23
APOBP04114 AL590762.3-201ENST00000436372 640 ntBASIC1.12□□□□□ -2.23
APOBP04114 SSXP5-201ENST00000443473 287 ntBASIC1.12□□□□□ -2.23
APOBP04114 AC027673.1-201ENST00000456245 405 ntBASIC1.12□□□□□ -2.23
APOBP04114 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.12□□□□□ -2.23
APOBP04114 AC011604.1-201ENST00000545978 196 ntBASIC1.12□□□□□ -2.23
APOBP04114 OR1S1-201ENST00000624470 978 ntBASIC1.12□□□□□ -2.23
APOBP04114 AC092159.4-201ENST00000624944 550 ntBASIC1.12□□□□□ -2.23
APOBP04114 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
APOBP04114 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
APOBP04114 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.12□□□□□ -2.23
APOBP04114 MED6P1-201ENST00000439659 713 ntBASIC1.12□□□□□ -2.23
APOBP04114 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.12□□□□□ -2.23
APOBP04114 AC104564.1-201ENST00000493028 407 ntBASIC1.12□□□□□ -2.23
APOBP04114 ATP5EP1-201ENST00000510257 156 ntBASIC1.12□□□□□ -2.23
APOBP04114 TTC39CP1-201ENST00000512513 755 ntBASIC1.12□□□□□ -2.23
APOBP04114 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.12□□□□□ -2.23
APOBP04114 PSMA3P-201ENST00000555485 635 ntBASIC1.12□□□□□ -2.23
APOBP04114 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
APOBP04114 TRIAP1P1-201ENST00000427062 225 ntBASIC1.11□□□□□ -2.23
APOBP04114 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
APOBP04114 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.11□□□□□ -2.23
APOBP04114 AC024560.3-201ENST00000608482 349 ntBASIC1.11□□□□□ -2.23
APOBP04114 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
APOBP04114 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.11□□□□□ -2.23
APOBP04114 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.11□□□□□ -2.23
APOBP04114 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.11□□□□□ -2.23
APOBP04114 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
APOBP04114 RNU6-342P-201ENST00000384521 104 ntBASIC1.11□□□□□ -2.23
APOBP04114 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.11□□□□□ -2.23
APOBP04114 GSTA11P-201ENST00000452866 669 ntBASIC1.11□□□□□ -2.23
APOBP04114 BX322784.1-201ENST00000455793 1077 ntBASIC1.11□□□□□ -2.23
APOBP04114 AC006390.1-201ENST00000508068 283 ntBASIC1.11□□□□□ -2.23
APOBP04114 AC022634.1-201ENST00000520765 532 ntBASIC1.11□□□□□ -2.23
APOBP04114 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.11□□□□□ -2.23
APOBP04114 CBX3P5-201ENST00000552017 521 ntBASIC1.11□□□□□ -2.23
APOBP04114 MIR4448-201ENST00000584360 86 ntBASIC1.11□□□□□ -2.23
APOBP04114 AL512598.1-201ENST00000610158 273 ntBASIC1.11□□□□□ -2.23
APOBP04114 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.11□□□□□ -2.23
APOBP04114 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.11□□□□□ -2.23
APOBP04114 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
APOBP04114 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.11□□□□□ -2.23
APOBP04114 SNORD48-201ENST00000364953 64 ntBASIC1.11□□□□□ -2.23
APOBP04114 AL358075.3-201ENST00000426289 226 ntBASIC1.11□□□□□ -2.23
APOBP04114 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.11□□□□□ -2.23
APOBP04114 RPS15AP36-201ENST00000492022 382 ntBASIC1.11□□□□□ -2.23
APOBP04114 AC126118.1-201ENST00000607744 628 ntBASIC1.11□□□□□ -2.23
APOBP04114 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
APOBP04114 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
APOBP04114 ZNF876P-202ENST00000398732 1485 ntBASIC1.11□□□□□ -2.23
APOBP04114 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
APOBP04114 RNU6-1080P-201ENST00000383982 107 ntBASIC1.11□□□□□ -2.23
APOBP04114 HMGB1P27-201ENST00000431429 603 ntBASIC1.11□□□□□ -2.23
APOBP04114 AL590664.1-201ENST00000448065 339 ntBASIC1.11□□□□□ -2.23
APOBP04114 RPL23AP7-203ENST00000449021 469 ntBASIC1.11□□□□□ -2.23
APOBP04114 SUMO2P4-201ENST00000504193 276 ntBASIC1.11□□□□□ -2.23
APOBP04114 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.11□□□□□ -2.23
APOBP04114 AL354943.1-201ENST00000572103 781 ntBASIC1.11□□□□□ -2.23
APOBP04114 AC023043.3-201ENST00000593113 385 ntBASIC1.11□□□□□ -2.23
APOBP04114 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.11□□□□□ -2.23
APOBP04114 AC098679.5-201ENST00000624394 571 ntBASIC1.11□□□□□ -2.23
APOBP04114 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
APOBP04114 Y_RNA.178-201ENST00000363832 102 ntBASIC1.1□□□□□ -2.23
APOBP04114 MTND1P23-201ENST00000416931 372 ntBASIC1.1□□□□□ -2.23
APOBP04114 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.1□□□□□ -2.23
APOBP04114 AC025033.1-201ENST00000463883 194 ntBASIC1.1□□□□□ -2.23
APOBP04114 TRAV31-201ENST00000502780 342 ntBASIC1.1□□□□□ -2.23
APOBP04114 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.1□□□□□ -2.23
APOBP04114 AP002748.2-201ENST00000528671 348 ntBASIC1.1□□□□□ -2.23
APOBP04114 AC091488.1-201ENST00000604239 660 ntBASIC1.1□□□□□ -2.23
APOBP04114 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.1□□□□□ -2.23
APOBP04114 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
APOBP04114 OR5AQ1P-203ENST00000641818 1529 ntBASIC1.1□□□□□ -2.23
APOBP04114 EIF1AXP1-201ENST00000419267 435 ntBASIC1.1□□□□□ -2.23
APOBP04114 RPS4XP11-201ENST00000446897 772 ntBASIC1.1□□□□□ -2.23
APOBP04114 Z99714.1-201ENST00000450463 807 ntBASIC1.1□□□□□ -2.23
APOBP04114 AMD1P1-201ENST00000457220 922 ntBASIC1.1□□□□□ -2.23
APOBP04114 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.1□□□□□ -2.23
APOBP04114 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms