Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
VTNP04004 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.49□□□□□ -1.85
VTNP04004 SNORA7.4-201ENST00000384249 137 ntBASIC3.49□□□□□ -1.85
VTNP04004 SNORD116-8-201ENST00000384365 95 ntBASIC3.49□□□□□ -1.85
VTNP04004 ARF4P3-201ENST00000397387 509 ntBASIC3.49□□□□□ -1.85
VTNP04004 AL122016.1-201ENST00000403365 367 ntBASIC3.49□□□□□ -1.85
VTNP04004 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.49□□□□□ -1.85
VTNP04004 OFD1P18Y-201ENST00000420889 959 ntBASIC3.49□□□□□ -1.85
VTNP04004 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.49□□□□□ -1.85
VTNP04004 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.49□□□□□ -1.85
VTNP04004 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.49□□□□□ -1.85
VTNP04004 UBE2D3P4-201ENST00000441973 436 ntBASIC3.49□□□□□ -1.85
VTNP04004 MRPS31P2-201ENST00000451581 518 ntBASIC3.49□□□□□ -1.85
VTNP04004 AP001486.1-201ENST00000463339 476 ntBASIC3.49□□□□□ -1.85
VTNP04004 BZW1P2-201ENST00000473537 826 ntBASIC3.49□□□□□ -1.85
VTNP04004 AC021205.2-201ENST00000480069 347 ntBASIC3.49□□□□□ -1.85
VTNP04004 AC108078.3-201ENST00000502633 489 ntBASIC3.49□□□□□ -1.85
VTNP04004 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.49□□□□□ -1.85
VTNP04004 MTCO3P44-201ENST00000510977 541 ntBASIC3.49□□□□□ -1.85
VTNP04004 MTCYBP43-201ENST00000513621 740 ntBASIC3.49□□□□□ -1.85
VTNP04004 SCARNA13-201ENST00000516672 275 ntBASIC3.49□□□□□ -1.85
VTNP04004 RNU6-232P-201ENST00000517144 64 ntBASIC3.49□□□□□ -1.85
VTNP04004 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.49□□□□□ -1.85
VTNP04004 AC087373.1-201ENST00000524920 491 ntBASIC3.49□□□□□ -1.85
VTNP04004 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.49□□□□□ -1.85
VTNP04004 AC006270.2-201ENST00000578523 652 ntBASIC3.49□□□□□ -1.85
VTNP04004 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.49□□□□□ -1.85
VTNP04004 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.49□□□□□ -1.85
VTNP04004 Z99497.2-201ENST00000603634 310 ntBASIC3.49□□□□□ -1.85
VTNP04004 AC112220.3-201ENST00000605502 502 ntBASIC3.49□□□□□ -1.85
VTNP04004 AC004825.2-201ENST00000616634 455 ntBASIC3.49□□□□□ -1.85
VTNP04004 U6.101-201ENST00000637707 76 ntBASIC3.49□□□□□ -1.85
VTNP04004 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VTNP04004 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VTNP04004 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.49□□□□□ -1.85
VTNP04004 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VTNP04004 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
VTNP04004 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
VTNP04004 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
VTNP04004 AP002907.1-201ENST00000606361 1430 ntBASIC3.48□□□□□ -1.85
VTNP04004 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VTNP04004 MT-TC-201ENST00000387405 66 ntBASIC3.48□□□□□ -1.85
VTNP04004 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VTNP04004 AL138885.1-201ENST00000405921 675 ntBASIC3.48□□□□□ -1.85
VTNP04004 PIGPP2-201ENST00000411569 458 ntBASIC3.48□□□□□ -1.85
VTNP04004 AC009518.2-201ENST00000418056 731 ntBASIC3.48□□□□□ -1.85
VTNP04004 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.48□□□□□ -1.85
VTNP04004 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.48□□□□□ -1.85
VTNP04004 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.48□□□□□ -1.85
VTNP04004 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.48□□□□□ -1.85
VTNP04004 MTCYBP3-201ENST00000445588 1137 ntBASIC3.48□□□□□ -1.85
VTNP04004 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.48□□□□□ -1.85
VTNP04004 MTND2P19-201ENST00000449129 1012 ntBASIC3.48□□□□□ -1.85
VTNP04004 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.48□□□□□ -1.85
VTNP04004 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.48□□□□□ -1.85
VTNP04004 TMED11P-201ENST00000479478 690 ntBASIC3.48□□□□□ -1.85
VTNP04004 AL049873.1-201ENST00000480540 376 ntBASIC3.48□□□□□ -1.85
VTNP04004 AC011825.1-201ENST00000484967 388 ntBASIC3.48□□□□□ -1.85
VTNP04004 FAM172BP-201ENST00000487497 1089 ntBASIC3.48□□□□□ -1.85
VTNP04004 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.48□□□□□ -1.85
VTNP04004 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.48□□□□□ -1.85
VTNP04004 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.48□□□□□ -1.85
VTNP04004 AC010486.3-201ENST00000511602 785 ntBASIC3.48□□□□□ -1.85
VTNP04004 RNU6-150P-201ENST00000516237 95 ntBASIC3.48□□□□□ -1.85
VTNP04004 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.48□□□□□ -1.85
VTNP04004 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.48□□□□□ -1.85
VTNP04004 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VTNP04004 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.48□□□□□ -1.85
VTNP04004 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.48□□□□□ -1.85
VTNP04004 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.48□□□□□ -1.85
VTNP04004 ISCA1P3-201ENST00000577104 373 ntBASIC3.48□□□□□ -1.85
VTNP04004 AC090616.2-202ENST00000584248 222 ntBASIC3.48□□□□□ -1.85
VTNP04004 VN1R90P-201ENST00000595717 726 ntBASIC3.48□□□□□ -1.85
VTNP04004 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.48□□□□□ -1.85
VTNP04004 IGHV3-29-201ENST00000604817 344 ntBASIC3.48□□□□□ -1.85
VTNP04004 AL137843.1-201ENST00000605078 385 ntBASIC3.48□□□□□ -1.85
VTNP04004 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.48□□□□□ -1.85
VTNP04004 AC090116.1-201ENST00000615679 446 ntBASIC3.48□□□□□ -1.85
VTNP04004 AL713922.2-201ENST00000619384 716 ntBASIC3.48□□□□□ -1.85
VTNP04004 AC091931.1-201ENST00000623488 728 ntBASIC3.48□□□□□ -1.85
VTNP04004 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VTNP04004 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
VTNP04004 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VTNP04004 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VTNP04004 AL353746.1-201ENST00000566293 6881 ntBASIC3.47□□□□□ -1.85
VTNP04004 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.47□□□□□ -1.85
VTNP04004 OR1S2-201ENST00000302592 978 ntBASIC3.47□□□□□ -1.85
VTNP04004 Y_RNA.560-201ENST00000384689 102 ntBASIC3.47□□□□□ -1.85
VTNP04004 AL121972.1-201ENST00000402023 252 ntBASIC3.47□□□□□ -1.85
VTNP04004 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VTNP04004 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.47□□□□□ -1.85
VTNP04004 AC244098.2-201ENST00000422068 99 ntBASIC3.47□□□□□ -1.85
VTNP04004 AL365203.2-201ENST00000423444 196 ntBASIC3.47□□□□□ -1.85
VTNP04004 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.47□□□□□ -1.85
VTNP04004 HMGB3P11-201ENST00000440127 604 ntBASIC3.47□□□□□ -1.85
VTNP04004 AL606662.1-201ENST00000445763 553 ntBASIC3.47□□□□□ -1.85
VTNP04004 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.47□□□□□ -1.85
VTNP04004 ELOCP23-201ENST00000452014 332 ntBASIC3.47□□□□□ -1.85
VTNP04004 SYPL1P1-201ENST00000473622 768 ntBASIC3.47□□□□□ -1.85
VTNP04004 AC072039.1-201ENST00000477611 581 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms