Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL031679.1-201ENST00000400616 525 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 MIR548F1-201ENST00000408667 84 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 RNU2-17P-201ENST00000410290 190 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 RNU4-74P-201ENST00000411280 161 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 MTND1P21-201ENST00000412991 285 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 RPL32P35-201ENST00000415214 394 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.48□□□□□ -1.85
COL2A1P02458 AC016831.2-201ENST00000417179 352 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 AC098592.1-201ENST00000419352 333 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.48□□□□□ -1.85
COL2A1P02458 DPRXP1-201ENST00000426312 460 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 AC244035.1-201ENST00000430042 390 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 GTF2IP7-202ENST00000436677 309 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.48□□□□□ -1.85
COL2A1P02458 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.48□□□□□ -1.85
COL2A1P02458 AL353898.1-201ENST00000444055 238 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 MTCYBP42-201ENST00000444653 1130 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 OR51B8P-201ENST00000449892 769 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 AC002553.2-201ENST00000453217 340 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 ZNF114P1-201ENST00000453500 292 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 MTCYBP1-201ENST00000454315 1119 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 RNU6-599P-201ENST00000459383 107 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 RNU6-1193P-201ENST00000459461 107 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 RPL9P33-201ENST00000484311 566 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
COL2A1P02458 EEF1B2P4-201ENST00000551398 348 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.48□□□□□ -1.85
COL2A1P02458 DUXAP1-201ENST00000556632 463 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 AC015871.2-201ENST00000603605 948 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 AC090186.1-201ENST00000605991 572 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 AC138749.5-201ENST00000611461 208 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 AC008083.4-201ENST00000615076 444 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 U6atac.1-201ENST00000616025 117 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 U6.42-201ENST00000618440 107 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 RNU6-368P-201ENST00000620928 107 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 AC009878.1-201ENST00000621819 340 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 RNU6-538P-201ENST00000622329 107 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.48□□□□□ -1.85
COL2A1P02458 AC093648.1-201ENST00000623546 606 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 AC019226.1-201ENST00000625666 515 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL2A1P02458 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL2A1P02458 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
COL2A1P02458 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL2A1P02458 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
COL2A1P02458 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL2A1P02458 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
COL2A1P02458 ASNSP3-201ENST00000451989 1306 ntBASIC3.48□□□□□ -1.85
COL2A1P02458 RNU4-51P-201ENST00000364206 140 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 RNU6-413P-201ENST00000384115 107 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 SNORA18.3-201ENST00000384122 132 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 RN7SKP142-201ENST00000411236 328 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AL663109.1-201ENST00000411498 844 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 RPS7P9-201ENST00000414704 586 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 TAF13P2-201ENST00000416876 286 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 OR2B8P-201ENST00000432841 938 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AL357520.1-201ENST00000441557 453 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.47□□□□□ -1.85
COL2A1P02458 RPS20P32-201ENST00000456044 356 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC126389.1-201ENST00000477436 290 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.47□□□□□ -1.85
COL2A1P02458 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.47□□□□□ -1.85
COL2A1P02458 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.47□□□□□ -1.85
COL2A1P02458 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.47□□□□□ -1.85
COL2A1P02458 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.47□□□□□ -1.85
COL2A1P02458 AC117522.3-201ENST00000507974 584 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.47□□□□□ -1.85
COL2A1P02458 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.47□□□□□ -1.85
COL2A1P02458 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.47□□□□□ -1.85
COL2A1P02458 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.47□□□□□ -1.85
COL2A1P02458 AC022662.1-201ENST00000580252 331 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.47□□□□□ -1.85
COL2A1P02458 WISP1-OT1-201ENST00000602893 642 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.47□□□□□ -1.85
COL2A1P02458 AC005021.1-201ENST00000608730 355 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC017083.3-201ENST00000609955 700 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AL592148.2-201ENST00000612210 372 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC107075.1-201ENST00000613695 314 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 U7.8-201ENST00000619968 63 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC007318.2-201ENST00000620999 243 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 AC006840.1-201ENST00000623069 542 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL2A1P02458 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL2A1P02458 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL2A1P02458 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.47□□□□□ -1.85
COL2A1P02458 ZNF849P-201ENST00000594711 1566 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.47□□□□□ -1.85
COL2A1P02458 MTND4P31-201ENST00000425607 1343 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL2A1P02458 OR10AB1P-202ENST00000641219 1686 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
COL2A1P02458 RNA5SP502-201ENST00000362694 119 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 Y_RNA.192-201ENST00000363977 102 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL2A1P02458 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL2A1P02458 SNORA70B-201ENST00000384210 135 ntBASIC3.47□□□□□ -1.85
COL2A1P02458 Y_RNA.465-201ENST00000384293 102 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms