Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC239860.2-201ENST00000525886 270 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AC103843.2-201ENST00000530523 682 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AC023813.2-201ENST00000564321 469 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 MIR4509-3-201ENST00000578671 94 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 MIR4509-2-201ENST00000583920 94 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 SNORD84-203ENST00000584275 78 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 DUXAP3-201ENST00000603616 594 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 BNIP3P11-201ENST00000603878 563 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AC021749.1-201ENST00000604322 607 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AL109618.2-201ENST00000605527 211 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AC106028.5-201ENST00000610332 395 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 MIR4509-1-201ENST00000618224 94 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 OR4G11P-202ENST00000642116 1414 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 FAM35BP-202ENST00000497389 3337 ntBASIC2.32□□□□□ -2.04
HLA-DQA1P01909 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DQA1P01909 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AF117829.1-206ENST00000621883 3802 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 RNU6-1242P-201ENST00000391052 103 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AL136372.1-201ENST00000403060 228 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AL356131.1-201ENST00000405826 414 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 RAB9AP3-201ENST00000412737 573 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 RPS15AP38-201ENST00000413110 372 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 MTATP6P20-201ENST00000414147 562 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 MTATP6P27-201ENST00000416987 621 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC069157.1-201ENST00000421749 137 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 MTCO2P23-201ENST00000425216 680 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 RPL36AP6-201ENST00000435770 321 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 EEF1A1P39-201ENST00000440791 250 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 RPL17P49-201ENST00000443728 411 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 CDC27P1-201ENST00000445384 715 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 RAB9AP1-201ENST00000449393 573 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 MTCO3P11-201ENST00000455103 774 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 OR6K1P-201ENST00000456766 971 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 HMGN2P13-201ENST00000476476 274 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 RPL9P33-201ENST00000484311 566 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC134050.1-201ENST00000495088 933 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 MTATP6P9-201ENST00000515039 680 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC006130.2-201ENST00000586202 326 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AL031176.1-201ENST00000604554 466 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC004853.1-201ENST00000604902 698 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AL390208.1-201ENST00000605885 644 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 RNU4-5P-201ENST00000607255 135 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 VIS1.1-201ENST00000610517 203 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 uc_338.25-201ENST00000613756 156 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC243312.2-201ENST00000623340 601 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 AC097714.1-201ENST00000511272 1647 ntBASIC2.31□□□□□ -2.04
HLA-DQA1P01909 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
HLA-DQA1P01909 Z83843.1-201ENST00000604070 3685 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 ZNF29P-201ENST00000225587 168 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 RNU4-35P-201ENST00000362588 141 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 RNU6-882P-201ENST00000391025 103 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 RNU6-952P-201ENST00000391164 108 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms