Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.35□□□□□ -1.71
ZBED1O96006 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.35□□□□□ -1.71
ZBED1O96006 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.35□□□□□ -1.71
ZBED1O96006 MTCO1P35-201ENST00000515270 228 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 DEFB108D-201ENST00000527787 222 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 AC245505.1-201ENST00000556398 224 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 BNIP3P5-201ENST00000562290 498 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 AC007599.1-201ENST00000568688 1174 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.35□□□□□ -1.71
ZBED1O96006 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.35□□□□□ -1.71
ZBED1O96006 AC006270.2-201ENST00000578523 652 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 MIR3118-1-201ENST00000581787 76 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.35□□□□□ -1.71
ZBED1O96006 AC068790.2-201ENST00000602601 557 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 AC008277.2-201ENST00000605196 797 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 AL161734.1-201ENST00000609720 557 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 AC064801.1-201ENST00000612025 407 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 AL450472.3-201ENST00000615578 367 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.35□□□□□ -1.71
ZBED1O96006 AL603758.1-201ENST00000618654 241 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 AL353748.2-201ENST00000622148 471 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 AC243312.2-201ENST00000623340 601 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.35□□□□□ -1.71
ZBED1O96006 MIR4275-201ENST00000636486 87 ntBASIC4.35□□□□□ -1.71
ZBED1O96006 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZBED1O96006 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.35□□□□□ -1.71
ZBED1O96006 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZBED1O96006 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZBED1O96006 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ZBED1O96006 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZBED1O96006 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.35□□□□□ -1.71
ZBED1O96006 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.34□□□□□ -1.71
ZBED1O96006 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.34□□□□□ -1.71
ZBED1O96006 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.34□□□□□ -1.71
ZBED1O96006 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.34□□□□□ -1.71
ZBED1O96006 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ZBED1O96006 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ZBED1O96006 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ZBED1O96006 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
ZBED1O96006 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
ZBED1O96006 RPS3AP24-201ENST00000407896 734 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 RNA5SP317-201ENST00000410176 116 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 RNA5SP311-201ENST00000411290 116 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AC127391.1-201ENST00000411737 98 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.34□□□□□ -1.71
ZBED1O96006 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.34□□□□□ -1.71
ZBED1O96006 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.34□□□□□ -1.71
ZBED1O96006 AC004975.1-201ENST00000428733 208 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.34□□□□□ -1.71
ZBED1O96006 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.34□□□□□ -1.71
ZBED1O96006 AL031667.1-201ENST00000440222 725 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.34□□□□□ -1.71
ZBED1O96006 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.34□□□□□ -1.71
ZBED1O96006 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.34□□□□□ -1.71
ZBED1O96006 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.34□□□□□ -1.71
ZBED1O96006 RAD23BP3-201ENST00000454157 1152 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.34□□□□□ -1.71
ZBED1O96006 AC010587.1-201ENST00000505809 469 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 FTH1P21-201ENST00000512179 511 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.34□□□□□ -1.71
ZBED1O96006 RNA5SP315-201ENST00000516340 116 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 RNA5SP312-201ENST00000517068 116 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 DUXAP2-201ENST00000519198 589 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AC107934.1-201ENST00000522215 217 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.34□□□□□ -1.71
ZBED1O96006 DEFB108A-201ENST00000530110 222 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.34□□□□□ -1.71
ZBED1O96006 AC125611.2-201ENST00000551907 647 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.34□□□□□ -1.71
ZBED1O96006 AL133153.1-201ENST00000557756 303 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.34□□□□□ -1.71
ZBED1O96006 MIR3913-1-201ENST00000577744 102 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.34□□□□□ -1.71
ZBED1O96006 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.34□□□□□ -1.71
ZBED1O96006 AL391813.2-201ENST00000609113 322 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AC091304.9-201ENST00000612091 226 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AC093838.1-201ENST00000613014 469 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AL133173.2-201ENST00000614270 90 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 MIR7151-201ENST00000617477 60 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AL360181.4-201ENST00000621752 134 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 AC008785.1-201ENST00000624475 456 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.34□□□□□ -1.71
ZBED1O96006 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.34□□□□□ -1.71
ZBED1O96006 AC005832.2-201ENST00000538921 1430 ntBASIC4.34□□□□□ -1.71
ZBED1O96006 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ZBED1O96006 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
ZBED1O96006 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.34□□□□□ -1.72
ZBED1O96006 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
ZBED1O96006 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
ZBED1O96006 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZBED1O96006 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
ZBED1O96006 Z82217.1-201ENST00000625157 8149 ntBASIC4.33□□□□□ -1.72
ZBED1O96006 RNU6-600P-201ENST00000362524 99 ntBASIC4.33□□□□□ -1.72
ZBED1O96006 RPL23AP32-201ENST00000395315 459 ntBASIC4.33□□□□□ -1.72
ZBED1O96006 RNU2-66P-201ENST00000410650 161 ntBASIC4.33□□□□□ -1.72
ZBED1O96006 RPL7AP73-201ENST00000413490 353 ntBASIC4.33□□□□□ -1.72
ZBED1O96006 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.33□□□□□ -1.72
ZBED1O96006 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ZBED1O96006 AC019097.1-201ENST00000424783 735 ntBASIC4.33□□□□□ -1.72
ZBED1O96006 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms