Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AC091390.3-201ENST00000426478 338 ntBASIC4.12□□□□□ -1.75
DDX58O95786 MTND1P32-201ENST00000433043 938 ntBASIC4.12□□□□□ -1.75
DDX58O95786 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.12□□□□□ -1.75
DDX58O95786 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX58O95786 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.12□□□□□ -1.75
DDX58O95786 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.12□□□□□ -1.75
DDX58O95786 HMGN2P7-201ENST00000456186 273 ntBASIC4.12□□□□□ -1.75
DDX58O95786 snoU13.8-201ENST00000458890 104 ntBASIC4.12□□□□□ -1.75
DDX58O95786 MEMO1P3-201ENST00000459811 302 ntBASIC4.12□□□□□ -1.75
DDX58O95786 AC093278.1-201ENST00000494700 600 ntBASIC4.12□□□□□ -1.75
DDX58O95786 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX58O95786 MIR2114-201ENST00000516645 80 ntBASIC4.12□□□□□ -1.75
DDX58O95786 Y_RNA.717-201ENST00000517106 92 ntBASIC4.12□□□□□ -1.75
DDX58O95786 IGKV2-23-201ENST00000518729 323 ntBASIC4.12□□□□□ -1.75
DDX58O95786 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.12□□□□□ -1.75
DDX58O95786 LRRC34P1-201ENST00000542742 915 ntBASIC4.12□□□□□ -1.75
DDX58O95786 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.12□□□□□ -1.75
DDX58O95786 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX58O95786 AC009101.1-201ENST00000568135 242 ntBASIC4.12□□□□□ -1.75
DDX58O95786 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX58O95786 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX58O95786 AL390208.1-201ENST00000605885 644 ntBASIC4.12□□□□□ -1.75
DDX58O95786 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX58O95786 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
DDX58O95786 AC079228.1-201ENST00000624774 1049 ntBASIC4.12□□□□□ -1.75
DDX58O95786 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
DDX58O95786 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
DDX58O95786 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
DDX58O95786 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
DDX58O95786 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DDX58O95786 RNU6-525P-201ENST00000363685 104 ntBASIC4.11□□□□□ -1.75
DDX58O95786 RNA5SP229-201ENST00000410809 99 ntBASIC4.11□□□□□ -1.75
DDX58O95786 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.11□□□□□ -1.75
DDX58O95786 RPL7P30-201ENST00000420888 709 ntBASIC4.11□□□□□ -1.75
DDX58O95786 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.11□□□□□ -1.75
DDX58O95786 SNRPEP7-201ENST00000438350 220 ntBASIC4.11□□□□□ -1.75
DDX58O95786 CYCSP32-201ENST00000440548 321 ntBASIC4.11□□□□□ -1.75
DDX58O95786 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.11□□□□□ -1.75
DDX58O95786 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.11□□□□□ -1.75
DDX58O95786 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.11□□□□□ -1.75
DDX58O95786 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.11□□□□□ -1.75
DDX58O95786 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.11□□□□□ -1.75
DDX58O95786 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.11□□□□□ -1.75
DDX58O95786 FAM60BP-201ENST00000578364 658 ntBASIC4.11□□□□□ -1.75
DDX58O95786 AP001029.3-201ENST00000588063 596 ntBASIC4.11□□□□□ -1.75
DDX58O95786 AP001330.4-201ENST00000604350 154 ntBASIC4.11□□□□□ -1.75
DDX58O95786 AC090425.2-201ENST00000608818 501 ntBASIC4.11□□□□□ -1.75
DDX58O95786 TUG1_1.1-201ENST00000610654 145 ntBASIC4.11□□□□□ -1.75
DDX58O95786 AL355493.4-201ENST00000618530 292 ntBASIC4.11□□□□□ -1.75
DDX58O95786 AP001486.2-201ENST00000561652 5113 ntBASIC4.11□□□□□ -1.75
DDX58O95786 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DDX58O95786 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
DDX58O95786 AL672296.1-201ENST00000427780 2158 ntBASIC4.11□□□□□ -1.75
DDX58O95786 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
DDX58O95786 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
DDX58O95786 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
DDX58O95786 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.1□□□□□ -1.75
DDX58O95786 AC116096.1-201ENST00000566804 2314 ntBASIC4.1□□□□□ -1.75
DDX58O95786 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX58O95786 RNU6-173P-201ENST00000364215 104 ntBASIC4.1□□□□□ -1.75
DDX58O95786 DEFB109C-201ENST00000382575 264 ntBASIC4.1□□□□□ -1.75
DDX58O95786 DEFB109B-201ENST00000382656 264 ntBASIC4.1□□□□□ -1.75
DDX58O95786 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.1□□□□□ -1.75
DDX58O95786 MTCYBP38-201ENST00000417160 1123 ntBASIC4.1□□□□□ -1.75
DDX58O95786 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.1□□□□□ -1.75
DDX58O95786 DUTP6-201ENST00000425573 462 ntBASIC4.1□□□□□ -1.75
DDX58O95786 AC079780.1-201ENST00000428259 207 ntBASIC4.1□□□□□ -1.75
DDX58O95786 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.1□□□□□ -1.75
DDX58O95786 ZYG11AP1-201ENST00000430329 837 ntBASIC4.1□□□□□ -1.75
DDX58O95786 AL353705.1-201ENST00000433468 480 ntBASIC4.1□□□□□ -1.75
DDX58O95786 CST9LP2-201ENST00000437612 320 ntBASIC4.1□□□□□ -1.75
DDX58O95786 MTCYBP34-201ENST00000439552 670 ntBASIC4.1□□□□□ -1.75
DDX58O95786 AL662791.1-201ENST00000441992 928 ntBASIC4.1□□□□□ -1.75
DDX58O95786 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.1□□□□□ -1.75
DDX58O95786 AC115115.1-201ENST00000449927 248 ntBASIC4.1□□□□□ -1.75
DDX58O95786 RPL23AP35-201ENST00000451906 501 ntBASIC4.1□□□□□ -1.75
DDX58O95786 ELOCP23-201ENST00000452014 332 ntBASIC4.1□□□□□ -1.75
DDX58O95786 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX58O95786 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.1□□□□□ -1.75
DDX58O95786 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.1□□□□□ -1.75
DDX58O95786 BX322784.1-201ENST00000455793 1077 ntBASIC4.1□□□□□ -1.75
DDX58O95786 RPL23AP31-201ENST00000456160 467 ntBASIC4.1□□□□□ -1.75
DDX58O95786 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.1□□□□□ -1.75
DDX58O95786 RN7SL863P-201ENST00000462370 296 ntBASIC4.1□□□□□ -1.75
DDX58O95786 RPS3AP43-201ENST00000479743 781 ntBASIC4.1□□□□□ -1.75
DDX58O95786 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.1□□□□□ -1.75
DDX58O95786 AC096751.1-202ENST00000502691 1067 ntBASIC4.1□□□□□ -1.75
DDX58O95786 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX58O95786 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.1□□□□□ -1.75
DDX58O95786 NDUFB4P9-201ENST00000511646 388 ntBASIC4.1□□□□□ -1.75
DDX58O95786 RNA5SP468-201ENST00000516782 93 ntBASIC4.1□□□□□ -1.75
DDX58O95786 MIR2276-201ENST00000516886 89 ntBASIC4.1□□□□□ -1.75
DDX58O95786 AP003461.1-201ENST00000528866 78 ntBASIC4.1□□□□□ -1.75
DDX58O95786 SNRPGP16-201ENST00000533275 226 ntBASIC4.1□□□□□ -1.75
DDX58O95786 AC092851.1-201ENST00000535964 478 ntBASIC4.1□□□□□ -1.75
DDX58O95786 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.1□□□□□ -1.75
DDX58O95786 OR6C7P-201ENST00000547875 934 ntBASIC4.1□□□□□ -1.75
DDX58O95786 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.1□□□□□ -1.75
DDX58O95786 ZNF192P1-203ENST00000565888 810 ntBASIC4.1□□□□□ -1.75
DDX58O95786 AL158211.1-201ENST00000566763 763 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms