Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL360157.1-201ENST00000565962 87 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-2O95096 VN1R79P-201ENST00000593540 513 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AC119751.7-201ENST00000600494 245 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AL606490.9-201ENST00000603331 271 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AC011468.4-201ENST00000603942 409 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX2-2O95096 AC004908.2-201ENST00000609090 574 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AC108479.2-201ENST00000617314 601 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NKX2-2O95096 AC067931.1-201ENST00000624190 671 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 AC090582.1-201ENST00000636321 199 ntBASIC3.57□□□□□ -1.84
NKX2-2O95096 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX2-2O95096 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX2-2O95096 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX2-2O95096 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
NKX2-2O95096 AL133383.2-201ENST00000622958 2336 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX2-2O95096 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.56□□□□□ -1.84
NKX2-2O95096 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.56□□□□□ -1.84
NKX2-2O95096 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NKX2-2O95096 RNU4-24P-201ENST00000364565 139 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 RNA5SP283-201ENST00000365604 119 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.56□□□□□ -1.84
NKX2-2O95096 RNU4-65P-201ENST00000410473 140 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 RAB28P1-201ENST00000411517 641 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 HMGN1P24-201ENST00000412282 298 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-2O95096 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NKX2-2O95096 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-2O95096 AC024082.2-201ENST00000434771 238 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-2O95096 AF228730.2-201ENST00000438784 848 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 PGBD4P3-201ENST00000440731 581 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 MTCO1P19-201ENST00000443487 500 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-2O95096 RPL23AP31-201ENST00000456160 467 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.56□□□□□ -1.84
NKX2-2O95096 TMED11P-201ENST00000479478 690 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 AC092451.1-201ENST00000480211 153 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-2O95096 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-2O95096 CBX3P3-201ENST00000508108 532 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 FTH1P9-201ENST00000513251 355 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX2-2O95096 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.56□□□□□ -1.84
NKX2-2O95096 HMGN1P28-201ENST00000521340 364 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-2O95096 DEFB108D-201ENST00000527787 222 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NKX2-2O95096 AC123904.2-201ENST00000548059 300 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 AC024909.2-201ENST00000553035 286 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.56□□□□□ -1.84
NKX2-2O95096 MTCYBP33-201ENST00000575007 1130 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-2O95096 COX6CP3-201ENST00000580869 223 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 BNIP3P8-201ENST00000597863 560 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 AL137849.1-201ENST00000604767 169 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 AL034351.1-201ENST00000605288 668 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-2O95096 AC093838.1-201ENST00000613014 469 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 MIR6810-201ENST00000622701 70 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 AC112204.3-201ENST00000623822 332 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 AL159972.1-201ENST00000625150 448 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 MIR4275-201ENST00000636486 87 ntBASIC3.56□□□□□ -1.84
NKX2-2O95096 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NKX2-2O95096 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX2-2O95096 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NKX2-2O95096 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NKX2-2O95096 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
NKX2-2O95096 AC024560.2-201ENST00000507981 1497 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NKX2-2O95096 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
NKX2-2O95096 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NKX2-2O95096 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX2-2O95096 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX2-2O95096 RNU6-223P-201ENST00000362830 107 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 RNU5A-8P-201ENST00000364102 114 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 U1.1-201ENST00000384101 164 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX2-2O95096 MORF4L1P6-201ENST00000418771 268 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AC016907.1-201ENST00000419483 435 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-2O95096 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-2O95096 AC004975.1-201ENST00000428733 208 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.55□□□□□ -1.84
NKX2-2O95096 AL353706.1-201ENST00000436728 494 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-2O95096 RPL26P6-201ENST00000440913 438 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 USP9YP29-201ENST00000445112 563 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.55□□□□□ -1.84
NKX2-2O95096 NUTF2P7-201ENST00000453086 375 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-2O95096 RNU7-59P-201ENST00000459101 61 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 OR9M1P-201ENST00000459641 921 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 AC135721.1-201ENST00000497954 479 ntBASIC3.55□□□□□ -1.84
NKX2-2O95096 BTF3L4P4-201ENST00000506381 449 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms