Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RNA5SP210-201ENST00000391034 120 ntBASIC0.86□□□□□ -2.27
USH2AO75445 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC0.86□□□□□ -2.27
USH2AO75445 AL139109.1-201ENST00000455491 297 ntBASIC0.86□□□□□ -2.27
USH2AO75445 BX322784.1-201ENST00000455793 1077 ntBASIC0.86□□□□□ -2.27
USH2AO75445 AC006390.1-201ENST00000508068 283 ntBASIC0.86□□□□□ -2.27
USH2AO75445 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC0.86□□□□□ -2.27
USH2AO75445 AC110741.2-201ENST00000605278 268 ntBASIC0.86□□□□□ -2.27
USH2AO75445 AC110774.1-201ENST00000623567 2018 ntBASIC0.86□□□□□ -2.27
USH2AO75445 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.86□□□□□ -2.27
USH2AO75445 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC0.86□□□□□ -2.27
USH2AO75445 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC0.86□□□□□ -2.27
USH2AO75445 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
USH2AO75445 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
USH2AO75445 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
USH2AO75445 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
USH2AO75445 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
USH2AO75445 RNU1-138P-201ENST00000384093 164 ntBASIC0.86□□□□□ -2.27
USH2AO75445 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC0.86□□□□□ -2.27
USH2AO75445 AL590762.3-201ENST00000436372 640 ntBASIC0.86□□□□□ -2.27
USH2AO75445 AP000936.3-201ENST00000438127 255 ntBASIC0.86□□□□□ -2.27
USH2AO75445 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC0.86□□□□□ -2.27
USH2AO75445 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.86□□□□□ -2.27
USH2AO75445 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC0.86□□□□□ -2.27
USH2AO75445 MIR6132-201ENST00000622083 109 ntBASIC0.86□□□□□ -2.27
USH2AO75445 AL136164.4-201ENST00000625013 2135 ntBASIC0.86□□□□□ -2.27
USH2AO75445 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC0.86□□□□□ -2.27
USH2AO75445 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
USH2AO75445 AC010680.1-201ENST00000590024 3590 ntBASIC0.85□□□□□ -2.27
USH2AO75445 RNU1-42P-201ENST00000364033 160 ntBASIC0.85□□□□□ -2.27
USH2AO75445 GCNT6-201ENST00000379591 934 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
USH2AO75445 RPS15AP6-201ENST00000420703 385 ntBASIC0.85□□□□□ -2.27
USH2AO75445 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.85□□□□□ -2.27
USH2AO75445 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.85□□□□□ -2.27
USH2AO75445 RPS15AP36-201ENST00000492022 382 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC0.85□□□□□ -2.27
USH2AO75445 AC021146.5-201ENST00000503544 545 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AC114786.4-201ENST00000508771 728 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AC114797.1-201ENST00000514003 728 ntBASIC0.85□□□□□ -2.27
USH2AO75445 RNU6ATAC12P-201ENST00000516542 115 ntBASIC0.85□□□□□ -2.27
USH2AO75445 MIR2114-201ENST00000516645 80 ntBASIC0.85□□□□□ -2.27
USH2AO75445 COX6CP5-201ENST00000527162 228 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AC091515.1-201ENST00000548110 679 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC0.85□□□□□ -2.27
USH2AO75445 BNIP3P7-201ENST00000605641 516 ntBASIC0.85□□□□□ -2.27
USH2AO75445 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
USH2AO75445 RNU6-35P-201ENST00000384530 107 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC0.85□□□□□ -2.27
USH2AO75445 SSXP1-201ENST00000453640 473 ntBASIC0.85□□□□□ -2.27
USH2AO75445 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC0.85□□□□□ -2.27
USH2AO75445 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC0.85□□□□□ -2.27
USH2AO75445 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC0.85□□□□□ -2.27
USH2AO75445 AP003467.2-201ENST00000520175 319 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.85□□□□□ -2.27
USH2AO75445 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC0.85□□□□□ -2.27
USH2AO75445 AC009831.4-201ENST00000620744 325 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AL353748.2-201ENST00000622148 471 ntBASIC0.85□□□□□ -2.27
USH2AO75445 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC0.85□□□□□ -2.27
USH2AO75445 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC0.85□□□□□ -2.27
USH2AO75445 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
USH2AO75445 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
USH2AO75445 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC0.85□□□□□ -2.27
USH2AO75445 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
USH2AO75445 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
USH2AO75445 RN7SKP285-201ENST00000410137 318 ntBASIC0.85□□□□□ -2.27
USH2AO75445 RNA5SP129-201ENST00000410276 118 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.85□□□□□ -2.27
USH2AO75445 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC0.85□□□□□ -2.27
USH2AO75445 USP9YP8-201ENST00000441913 500 ntBASIC0.85□□□□□ -2.27
USH2AO75445 CALM1P2-201ENST00000452941 448 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AC092451.2-201ENST00000538746 658 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC0.85□□□□□ -2.27
USH2AO75445 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC0.85□□□□□ -2.27
USH2AO75445 RPS3AP23-202ENST00000574601 686 ntBASIC0.85□□□□□ -2.27
USH2AO75445 MIR5002-201ENST00000584713 97 ntBASIC0.85□□□□□ -2.27
USH2AO75445 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.85□□□□□ -2.27
USH2AO75445 HPVC1-201ENST00000629899 1198 ntBASIC0.85□□□□□ -2.27
USH2AO75445 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC0.85□□□□□ -2.27
USH2AO75445 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
USH2AO75445 SEPT7P7-201ENST00000420492 1301 ntBASIC0.85□□□□□ -2.27
USH2AO75445 RNU1-75P-201ENST00000347264 129 ntBASIC0.85□□□□□ -2.27
USH2AO75445 RNU1-51P-201ENST00000365345 176 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.85□□□□□ -2.27
USH2AO75445 RNA5SP76-201ENST00000516277 87 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AC090819.1-201ENST00000523800 1111 ntBASIC0.85□□□□□ -2.27
USH2AO75445 AL008729.2-201ENST00000606393 473 ntBASIC0.85□□□□□ -2.27
USH2AO75445 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
USH2AO75445 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC0.85□□□□□ -2.27
USH2AO75445 DBF4P1-201ENST00000412976 1892 ntBASIC0.85□□□□□ -2.27
USH2AO75445 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
USH2AO75445 RNU1-93P-201ENST00000364704 169 ntBASIC0.84□□□□□ -2.27
USH2AO75445 U8.8-201ENST00000365399 135 ntBASIC0.84□□□□□ -2.27
USH2AO75445 RHEBP3-201ENST00000411920 351 ntBASIC0.84□□□□□ -2.27
USH2AO75445 MTCYBP12-201ENST00000440559 1134 ntBASIC0.84□□□□□ -2.27
USH2AO75445 CDC42P1-201ENST00000456658 548 ntBASIC0.84□□□□□ -2.27
USH2AO75445 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC0.84□□□□□ -2.27
USH2AO75445 AC022790.1-201ENST00000522872 204 ntBASIC0.84□□□□□ -2.27
USH2AO75445 AC023825.1-201ENST00000566704 1030 ntBASIC0.84□□□□□ -2.27
USH2AO75445 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC0.84□□□□□ -2.27
USH2AO75445 PWAR6-201ENST00000552334 4618 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms