Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 RPL23AP49-201ENST00000492925 468 ntBASIC3.2□□□□□ -1.9
BRD4O60885 HMGB1P22-201ENST00000505315 124 ntBASIC3.2□□□□□ -1.9
BRD4O60885 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BRD4O60885 AC112673.1-201ENST00000513168 575 ntBASIC3.2□□□□□ -1.9
BRD4O60885 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.2□□□□□ -1.9
BRD4O60885 HMGB1P51-201ENST00000605166 638 ntBASIC3.2□□□□□ -1.9
BRD4O60885 U6.48-201ENST00000618523 106 ntBASIC3.2□□□□□ -1.9
BRD4O60885 ZNF37BP-203ENST00000452306 1352 ntBASIC3.2□□□□□ -1.9
BRD4O60885 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.2□□□□□ -1.9
BRD4O60885 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.19□□□□□ -1.9
BRD4O60885 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRD4O60885 ADAM3A-203ENST00000461344 2157 ntBASIC3.19□□□□□ -1.9
BRD4O60885 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
BRD4O60885 METTL21EP-201ENST00000298105 713 ntBASIC3.19□□□□□ -1.9
BRD4O60885 RNU6-837P-201ENST00000391056 108 ntBASIC3.19□□□□□ -1.9
BRD4O60885 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.19□□□□□ -1.9
BRD4O60885 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.19□□□□□ -1.9
BRD4O60885 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.19□□□□□ -1.9
BRD4O60885 Z96811.1-201ENST00000445880 108 ntBASIC3.19□□□□□ -1.9
BRD4O60885 RPL9P6-201ENST00000492764 598 ntBASIC3.19□□□□□ -1.9
BRD4O60885 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.19□□□□□ -1.9
BRD4O60885 AP001317.1-201ENST00000531194 960 ntBASIC3.19□□□□□ -1.9
BRD4O60885 AC078814.3-201ENST00000553036 491 ntBASIC3.19□□□□□ -1.9
BRD4O60885 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.19□□□□□ -1.9
BRD4O60885 AC115989.2-201ENST00000578640 563 ntBASIC3.19□□□□□ -1.9
BRD4O60885 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
BRD4O60885 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.19□□□□□ -1.9
BRD4O60885 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.19□□□□□ -1.9
BRD4O60885 AP004372.1-201ENST00000604842 844 ntBASIC3.19□□□□□ -1.9
BRD4O60885 AC019159.1-201ENST00000605094 187 ntBASIC3.19□□□□□ -1.9
BRD4O60885 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.19□□□□□ -1.9
BRD4O60885 AL353997.5-201ENST00000618886 171 ntBASIC3.19□□□□□ -1.9
BRD4O60885 AC007275.1-201ENST00000621243 671 ntBASIC3.19□□□□□ -1.9
BRD4O60885 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.19□□□□□ -1.9
BRD4O60885 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BRD4O60885 RNU6-31P-201ENST00000384388 108 ntBASIC3.18□□□□□ -1.9
BRD4O60885 AL591416.1-201ENST00000404015 867 ntBASIC3.18□□□□□ -1.9
BRD4O60885 RPL19P1-201ENST00000411635 428 ntBASIC3.18□□□□□ -1.9
BRD4O60885 HMGN2P35-201ENST00000412164 270 ntBASIC3.18□□□□□ -1.9
BRD4O60885 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.18□□□□□ -1.9
BRD4O60885 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.18□□□□□ -1.9
BRD4O60885 RSL24D1P2-201ENST00000445584 366 ntBASIC3.18□□□□□ -1.9
BRD4O60885 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.18□□□□□ -1.9
BRD4O60885 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.18□□□□□ -1.9
BRD4O60885 AC027673.1-201ENST00000456245 405 ntBASIC3.18□□□□□ -1.9
BRD4O60885 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
BRD4O60885 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.18□□□□□ -1.9
BRD4O60885 RPL23AP78-201ENST00000599928 470 ntBASIC3.18□□□□□ -1.9
BRD4O60885 AL009028.1-201ENST00000604895 802 ntBASIC3.18□□□□□ -1.9
BRD4O60885 AC020923.1-201ENST00000624021 917 ntBASIC3.18□□□□□ -1.9
BRD4O60885 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.18□□□□□ -1.9
BRD4O60885 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.18□□□□□ -1.9
BRD4O60885 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
BRD4O60885 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
BRD4O60885 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.17□□□□□ -1.9
BRD4O60885 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
BRD4O60885 Y_RNA.4-201ENST00000362333 112 ntBASIC3.17□□□□□ -1.9
BRD4O60885 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.17□□□□□ -1.9
BRD4O60885 AC073310.1-201ENST00000423226 1033 ntBASIC3.17□□□□□ -1.9
BRD4O60885 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.17□□□□□ -1.9
BRD4O60885 AC018634.1-201ENST00000437554 401 ntBASIC3.17□□□□□ -1.9
BRD4O60885 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
BRD4O60885 AC025857.1-201ENST00000525252 377 ntBASIC3.17□□□□□ -1.9
BRD4O60885 AC022690.1-201ENST00000526681 550 ntBASIC3.17□□□□□ -1.9
BRD4O60885 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.17□□□□□ -1.9
BRD4O60885 OR11H5P-201ENST00000554039 926 ntBASIC3.17□□□□□ -1.9
BRD4O60885 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.17□□□□□ -1.9
BRD4O60885 ADAM3B-201ENST00000569937 840 ntBASIC3.17□□□□□ -1.9
BRD4O60885 AC091057.2-201ENST00000602594 792 ntBASIC3.17□□□□□ -1.9
BRD4O60885 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.17□□□□□ -1.9
BRD4O60885 VN1R9P-201ENST00000614184 867 ntBASIC3.17□□□□□ -1.9
BRD4O60885 AC008083.4-201ENST00000615076 444 ntBASIC3.17□□□□□ -1.9
BRD4O60885 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.17□□□□□ -1.9
BRD4O60885 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
BRD4O60885 AC022336.2-201ENST00000568966 2538 ntBASIC3.17□□□□□ -1.9
BRD4O60885 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
BRD4O60885 AC138915.1-201ENST00000565427 1685 ntBASIC3.16□□□□□ -1.9
BRD4O60885 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
BRD4O60885 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
BRD4O60885 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
BRD4O60885 SNORD56.5-201ENST00000364281 72 ntBASIC3.16□□□□□ -1.9
BRD4O60885 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.16□□□□□ -1.9
BRD4O60885 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.16□□□□□ -1.9
BRD4O60885 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.16□□□□□ -1.9
BRD4O60885 OR4G11P-201ENST00000492842 939 ntBASIC3.16□□□□□ -1.9
BRD4O60885 AC104090.1-201ENST00000506341 1171 ntBASIC3.16□□□□□ -1.9
BRD4O60885 AC009901.1-201ENST00000506703 541 ntBASIC3.16□□□□□ -1.9
BRD4O60885 AC098799.2-201ENST00000509466 868 ntBASIC3.16□□□□□ -1.9
BRD4O60885 AC105914.1-201ENST00000511798 226 ntBASIC3.16□□□□□ -1.9
BRD4O60885 RNA5SP402-201ENST00000517148 110 ntBASIC3.16□□□□□ -1.9
BRD4O60885 AC090695.1-201ENST00000561269 1222 ntBASIC3.16□□□□□ -1.9
BRD4O60885 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.16□□□□□ -1.9
BRD4O60885 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.16□□□□□ -1.9
BRD4O60885 AC110994.2-201ENST00000635481 492 ntBASIC3.16□□□□□ -1.9
BRD4O60885 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
BRD4O60885 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
BRD4O60885 AC080128.1-201ENST00000474389 1917 ntBASIC3.16□□□□□ -1.9
BRD4O60885 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
BRD4O60885 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
BRD4O60885 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms