Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 DEFB108F-201ENST00000344638 222 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 RPL32P3-201ENST00000359025 275 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.18□□□□□ -2.06
SSNA1O43805 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SSNA1O43805 MIR135A2-201ENST00000384854 100 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 MIR490-201ENST00000384865 128 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 SNORA57.1-201ENST00000391227 145 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AC016769.3-201ENST00000396562 315 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AL356057.1-202ENST00000402263 756 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 RNU2-47P-201ENST00000410649 186 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.18□□□□□ -2.06
SSNA1O43805 AC007064.1-201ENST00000412238 351 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 RPLP0P7-201ENST00000416050 667 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AC245052.5-201ENST00000416320 649 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.18□□□□□ -2.06
SSNA1O43805 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.18□□□□□ -2.06
SSNA1O43805 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.18□□□□□ -2.06
SSNA1O43805 AL389915.1-201ENST00000422463 466 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 C4BPAP2-201ENST00000428434 478 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AC091286.1-201ENST00000431233 461 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AL445584.1-201ENST00000431451 330 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.18□□□□□ -2.06
SSNA1O43805 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.18□□□□□ -2.06
SSNA1O43805 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.18□□□□□ -2.06
SSNA1O43805 AL592447.1-201ENST00000447592 540 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.18□□□□□ -2.06
SSNA1O43805 RFC5P1-201ENST00000454419 874 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 RNU7-26P-201ENST00000458980 63 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AC133134.1-201ENST00000466800 359 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 MTND4LP3-201ENST00000468320 276 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AL135752.1-201ENST00000479477 471 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 FAM172BP-201ENST00000487497 1089 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AC231760.1-201ENST00000498002 260 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.18□□□□□ -2.06
SSNA1O43805 AC009812.2-201ENST00000517657 457 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 COX6CP5-201ENST00000527162 228 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 DEFB108D-201ENST00000527787 222 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AC106734.1-201ENST00000568646 663 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 MIR3921-201ENST00000577308 85 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.18□□□□□ -2.06
SSNA1O43805 AF230666.2-201ENST00000602328 725 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 BNIP3P11-201ENST00000603878 563 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AL161756.2-201ENST00000604597 246 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.18□□□□□ -2.06
SSNA1O43805 AC004852.3-201ENST00000614131 326 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 AC079395.3-201ENST00000615161 484 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 HMGB1P24-202ENST00000615653 685 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SSNA1O43805 OR5H6-203ENST00000642105 978 ntBASIC2.18□□□□□ -2.06
SSNA1O43805 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SSNA1O43805 MFSD8-213ENST00000641134 1327 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.17□□□□□ -2.06
SSNA1O43805 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.17□□□□□ -2.06
SSNA1O43805 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.17□□□□□ -2.06
SSNA1O43805 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 SNORA68.1-201ENST00000364537 132 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 SNORA9-201ENST00000384215 133 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 AL122016.1-201ENST00000403365 367 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 AL139098.1-201ENST00000407291 389 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 FCF1P2-201ENST00000415284 583 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 AL355994.1-201ENST00000424379 260 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.17□□□□□ -2.06
SSNA1O43805 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.17□□□□□ -2.06
SSNA1O43805 AC112653.1-201ENST00000443851 386 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 RPS15AP27-201ENST00000449183 343 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 RNU6-420P-201ENST00000458780 107 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 RPL7P15-201ENST00000461190 712 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 AC108729.2-201ENST00000476543 840 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 RBM43P1-201ENST00000476891 1081 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 AC084024.2-201ENST00000503480 791 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 MTCYBP17-201ENST00000503579 789 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 AC114322.1-201ENST00000506771 926 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.17□□□□□ -2.06
SSNA1O43805 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.17□□□□□ -2.06
SSNA1O43805 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.17□□□□□ -2.06
SSNA1O43805 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.17□□□□□ -2.06
SSNA1O43805 ARL2BPP5-201ENST00000523141 481 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.17□□□□□ -2.06
SSNA1O43805 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.17□□□□□ -2.06
SSNA1O43805 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.17□□□□□ -2.06
SSNA1O43805 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.17□□□□□ -2.06
SSNA1O43805 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.17□□□□□ -2.06
SSNA1O43805 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.17□□□□□ -2.06
SSNA1O43805 AC079791.1-201ENST00000605356 973 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 AP005137.2-201ENST00000609238 400 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.17□□□□□ -2.06
SSNA1O43805 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.17□□□□□ -2.06
SSNA1O43805 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 AL049781.1-201ENST00000623195 3585 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.17□□□□□ -2.06
SSNA1O43805 MTCO1P23-201ENST00000415223 1526 ntBASIC2.17□□□□□ -2.06
SSNA1O43805 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SSNA1O43805 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SSNA1O43805 SNORD56.4-201ENST00000363883 71 ntBASIC2.16□□□□□ -2.06
SSNA1O43805 RNU1-51P-201ENST00000365345 176 ntBASIC2.16□□□□□ -2.06
SSNA1O43805 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.16□□□□□ -2.06
SSNA1O43805 MIR325-201ENST00000385260 98 ntBASIC2.16□□□□□ -2.06
SSNA1O43805 U3.37-201ENST00000408528 213 ntBASIC2.16□□□□□ -2.06
SSNA1O43805 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.16□□□□□ -2.06
SSNA1O43805 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms