Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.24□□□□□ -1.73
PROM1O43490 AL391813.2-201ENST00000609113 322 ntBASIC4.24□□□□□ -1.73
PROM1O43490 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.24□□□□□ -1.73
PROM1O43490 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.24□□□□□ -1.73
PROM1O43490 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PROM1O43490 AP003122.6-201ENST00000623831 495 ntBASIC4.24□□□□□ -1.73
PROM1O43490 FER-210ENST00000628534 558 ntTSL 5 BASIC4.24□□□□□ -1.73
PROM1O43490 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.24□□□□□ -1.73
PROM1O43490 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.24□□□□□ -1.73
PROM1O43490 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PROM1O43490 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
PROM1O43490 ELL2P4-201ENST00000446870 1376 ntBASIC4.24□□□□□ -1.73
PROM1O43490 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.24□□□□□ -1.73
PROM1O43490 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PROM1O43490 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PROM1O43490 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PROM1O43490 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PROM1O43490 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PROM1O43490 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.23□□□□□ -1.73
PROM1O43490 MTCO1P24-201ENST00000515438 1558 ntBASIC4.23□□□□□ -1.73
PROM1O43490 MTND5P3-201ENST00000438536 1800 ntBASIC4.23□□□□□ -1.73
PROM1O43490 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PROM1O43490 RNA5SP52-201ENST00000362448 134 ntBASIC4.23□□□□□ -1.73
PROM1O43490 RNY1P12-201ENST00000364251 105 ntBASIC4.23□□□□□ -1.73
PROM1O43490 SNORD82-201ENST00000365530 70 ntBASIC4.23□□□□□ -1.73
PROM1O43490 RNU6-878P-201ENST00000384578 110 ntBASIC4.23□□□□□ -1.73
PROM1O43490 MIR93-201ENST00000385024 80 ntBASIC4.23□□□□□ -1.73
PROM1O43490 MIR23A-201ENST00000385245 73 ntBASIC4.23□□□□□ -1.73
PROM1O43490 MTATP6P18-201ENST00000417994 673 ntBASIC4.23□□□□□ -1.73
PROM1O43490 RPS15AP12-201ENST00000419498 388 ntBASIC4.23□□□□□ -1.73
PROM1O43490 ELOCP4-201ENST00000420090 333 ntBASIC4.23□□□□□ -1.73
PROM1O43490 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.23□□□□□ -1.73
PROM1O43490 AC006548.1-201ENST00000427470 102 ntBASIC4.23□□□□□ -1.73
PROM1O43490 PSMA6P3-201ENST00000428242 164 ntBASIC4.23□□□□□ -1.73
PROM1O43490 RPL23AP1-201ENST00000428990 471 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.23□□□□□ -1.73
PROM1O43490 GTF2IP20-201ENST00000431663 360 ntBASIC4.23□□□□□ -1.73
PROM1O43490 BNIP3P2-201ENST00000441221 577 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.23□□□□□ -1.73
PROM1O43490 AC093019.1-201ENST00000443135 252 ntBASIC4.23□□□□□ -1.73
PROM1O43490 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.23□□□□□ -1.73
PROM1O43490 ARL2BPP10-201ENST00000446487 531 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.23□□□□□ -1.73
PROM1O43490 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.23□□□□□ -1.73
PROM1O43490 SNRPGP6-201ENST00000451124 220 ntBASIC4.23□□□□□ -1.73
PROM1O43490 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.23□□□□□ -1.73
PROM1O43490 PMCHL2-203ENST00000457791 237 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AC022364.2-201ENST00000457963 554 ntBASIC4.23□□□□□ -1.73
PROM1O43490 RPS29P25-201ENST00000481709 171 ntBASIC4.23□□□□□ -1.73
PROM1O43490 HMGN1P12-201ENST00000499125 195 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.23□□□□□ -1.73
PROM1O43490 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.23□□□□□ -1.73
PROM1O43490 PPBPP1-201ENST00000510807 373 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.23□□□□□ -1.73
PROM1O43490 MTCO1P35-201ENST00000515270 228 ntBASIC4.23□□□□□ -1.73
PROM1O43490 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.23□□□□□ -1.73
PROM1O43490 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.23□□□□□ -1.73
PROM1O43490 AC090151.1-201ENST00000520784 730 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.23□□□□□ -1.73
PROM1O43490 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.23□□□□□ -1.73
PROM1O43490 AP003497.1-201ENST00000528472 562 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.23□□□□□ -1.73
PROM1O43490 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.23□□□□□ -1.73
PROM1O43490 AC034105.3-201ENST00000565294 442 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.23□□□□□ -1.73
PROM1O43490 MIR3167-201ENST00000579623 85 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.23□□□□□ -1.73
PROM1O43490 AL117336.2-201ENST00000602435 335 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AC008782.1-201ENST00000603386 430 ntBASIC4.23□□□□□ -1.73
PROM1O43490 Z84480.1-201ENST00000605131 311 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AL356218.2-201ENST00000605264 187 ntBASIC4.23□□□□□ -1.73
PROM1O43490 BNIP3P10-201ENST00000605360 577 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AP001330.5-201ENST00000607176 411 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AC128687.2-201ENST00000609657 566 ntBASIC4.23□□□□□ -1.73
PROM1O43490 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.23□□□□□ -1.73
PROM1O43490 AP005019.3-201ENST00000620418 560 ntBASIC4.23□□□□□ -1.73
PROM1O43490 AL359697.1-201ENST00000624879 587 ntBASIC4.23□□□□□ -1.73
PROM1O43490 CR381572.1-201ENST00000625098 102 ntBASIC4.23□□□□□ -1.73
PROM1O43490 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.23□□□□□ -1.73
PROM1O43490 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PROM1O43490 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.23□□□□□ -1.73
PROM1O43490 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.23□□□□□ -1.73
PROM1O43490 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PROM1O43490 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PROM1O43490 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PROM1O43490 AL592148.3-201ENST00000608771 2646 ntBASIC4.23□□□□□ -1.73
PROM1O43490 OR56B2P-202ENST00000641377 2453 ntBASIC4.22□□□□□ -1.73
PROM1O43490 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.22□□□□□ -1.73
PROM1O43490 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PROM1O43490 AC068254.2-201ENST00000623938 3577 ntBASIC4.22□□□□□ -1.73
PROM1O43490 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.22□□□□□ -1.73
PROM1O43490 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PROM1O43490 AC090337.1-201ENST00000579651 2074 ntBASIC4.22□□□□□ -1.73
PROM1O43490 RNU6-97P-201ENST00000363387 104 ntBASIC4.22□□□□□ -1.73
PROM1O43490 RNY4P16-201ENST00000364768 94 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AC068050.1-201ENST00000394891 380 ntBASIC4.22□□□□□ -1.73
PROM1O43490 RN7SKP235-201ENST00000410662 305 ntBASIC4.22□□□□□ -1.73
PROM1O43490 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.22□□□□□ -1.73
PROM1O43490 AC012065.2-201ENST00000421295 375 ntBASIC4.22□□□□□ -1.73
PROM1O43490 RPL7AP25-201ENST00000423357 805 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms