Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
MSI1O43347 ZNF734P-201ENST00000419494 1534 ntBASIC3.97□□□□□ -1.77
MSI1O43347 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
MSI1O43347 RNU6-1042P-201ENST00000384204 107 ntBASIC3.97□□□□□ -1.77
MSI1O43347 RNU6-339P-201ENST00000384310 107 ntBASIC3.97□□□□□ -1.77
MSI1O43347 AL590704.1-201ENST00000402856 794 ntBASIC3.97□□□□□ -1.77
MSI1O43347 SNORA3.3-201ENST00000408712 125 ntBASIC3.97□□□□□ -1.77
MSI1O43347 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.97□□□□□ -1.77
MSI1O43347 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.97□□□□□ -1.77
MSI1O43347 HMGB3P23-201ENST00000414981 585 ntBASIC3.97□□□□□ -1.77
MSI1O43347 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.97□□□□□ -1.77
MSI1O43347 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.97□□□□□ -1.77
MSI1O43347 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.97□□□□□ -1.77
MSI1O43347 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.97□□□□□ -1.77
MSI1O43347 MTND6P13-201ENST00000443510 523 ntBASIC3.97□□□□□ -1.77
MSI1O43347 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.97□□□□□ -1.77
MSI1O43347 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.97□□□□□ -1.77
MSI1O43347 HMGB1P15-201ENST00000453854 435 ntBASIC3.97□□□□□ -1.77
MSI1O43347 snoU109.1-201ENST00000459339 135 ntBASIC3.97□□□□□ -1.77
MSI1O43347 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.97□□□□□ -1.77
MSI1O43347 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.97□□□□□ -1.77
MSI1O43347 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.97□□□□□ -1.77
MSI1O43347 NDUFB4P2-201ENST00000509515 391 ntBASIC3.97□□□□□ -1.77
MSI1O43347 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.97□□□□□ -1.77
MSI1O43347 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.97□□□□□ -1.77
MSI1O43347 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.97□□□□□ -1.77
MSI1O43347 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.97□□□□□ -1.77
MSI1O43347 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.97□□□□□ -1.77
MSI1O43347 AP003117.2-201ENST00000606010 545 ntBASIC3.97□□□□□ -1.77
MSI1O43347 AL121772.2-201ENST00000614331 297 ntBASIC3.97□□□□□ -1.77
MSI1O43347 AC091834.1-201ENST00000614543 472 ntBASIC3.97□□□□□ -1.77
MSI1O43347 AP001506.1-201ENST00000615444 211 ntBASIC3.97□□□□□ -1.77
MSI1O43347 AC108479.2-201ENST00000617314 601 ntBASIC3.97□□□□□ -1.77
MSI1O43347 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.97□□□□□ -1.77
MSI1O43347 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
MSI1O43347 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.97□□□□□ -1.77
MSI1O43347 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
MSI1O43347 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.97□□□□□ -1.77
MSI1O43347 MTND5P26-201ENST00000426018 1752 ntBASIC3.97□□□□□ -1.77
MSI1O43347 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
MSI1O43347 PNPT1P2-201ENST00000456768 2050 ntBASIC3.96□□□□□ -1.77
MSI1O43347 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MSI1O43347 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
MSI1O43347 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MSI1O43347 AL161781.1-201ENST00000354277 403 ntBASIC3.96□□□□□ -1.78
MSI1O43347 MIR423-201ENST00000362201 94 ntBASIC3.96□□□□□ -1.78
MSI1O43347 Y_RNA.6-201ENST00000362350 114 ntBASIC3.96□□□□□ -1.78
MSI1O43347 Y_RNA.46-201ENST00000362695 102 ntBASIC3.96□□□□□ -1.78
MSI1O43347 Y_RNA.234-201ENST00000364409 97 ntBASIC3.96□□□□□ -1.78
MSI1O43347 RNU6-259P-201ENST00000383999 107 ntBASIC3.96□□□□□ -1.78
MSI1O43347 Y_RNA.548-201ENST00000384656 105 ntBASIC3.96□□□□□ -1.78
MSI1O43347 Y_RNA.582-201ENST00000391023 95 ntBASIC3.96□□□□□ -1.78
MSI1O43347 RNA5SP171-201ENST00000391071 115 ntBASIC3.96□□□□□ -1.78
MSI1O43347 SOD2P1-201ENST00000396543 562 ntBASIC3.96□□□□□ -1.78
MSI1O43347 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
MSI1O43347 RPL7P25-201ENST00000404151 721 ntBASIC3.96□□□□□ -1.78
MSI1O43347 AL591419.1-201ENST00000427423 339 ntBASIC3.96□□□□□ -1.78
MSI1O43347 EZH2P1-201ENST00000431167 291 ntBASIC3.96□□□□□ -1.78
MSI1O43347 SKP1P1-201ENST00000438081 489 ntBASIC3.96□□□□□ -1.78
MSI1O43347 AL500522.2-201ENST00000448562 343 ntBASIC3.96□□□□□ -1.78
MSI1O43347 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.96□□□□□ -1.78
MSI1O43347 NANOGP10-201ENST00000453325 895 ntBASIC3.96□□□□□ -1.78
MSI1O43347 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.96□□□□□ -1.78
MSI1O43347 AC093899.1-201ENST00000457984 376 ntBASIC3.96□□□□□ -1.78
MSI1O43347 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
MSI1O43347 AC034222.1-201ENST00000494052 532 ntBASIC3.96□□□□□ -1.78
MSI1O43347 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.96□□□□□ -1.78
MSI1O43347 AC107401.1-201ENST00000503426 685 ntBASIC3.96□□□□□ -1.78
MSI1O43347 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.96□□□□□ -1.78
MSI1O43347 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.96□□□□□ -1.78
MSI1O43347 RNU6-714P-201ENST00000516963 103 ntBASIC3.96□□□□□ -1.78
MSI1O43347 AP003467.2-201ENST00000520175 319 ntBASIC3.96□□□□□ -1.78
MSI1O43347 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.96□□□□□ -1.78
MSI1O43347 RPL21P5-201ENST00000554662 472 ntBASIC3.96□□□□□ -1.78
MSI1O43347 AC090877.1-201ENST00000561418 344 ntBASIC3.96□□□□□ -1.78
MSI1O43347 AC009101.1-201ENST00000568135 242 ntBASIC3.96□□□□□ -1.78
MSI1O43347 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.96□□□□□ -1.78
MSI1O43347 AL009028.1-201ENST00000604895 802 ntBASIC3.96□□□□□ -1.78
MSI1O43347 AC090578.1-201ENST00000604955 591 ntBASIC3.96□□□□□ -1.78
MSI1O43347 AC109347.2-201ENST00000610220 349 ntBASIC3.96□□□□□ -1.78
MSI1O43347 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.96□□□□□ -1.78
MSI1O43347 AC039056.2-201ENST00000622261 511 ntBASIC3.96□□□□□ -1.78
MSI1O43347 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.96□□□□□ -1.78
MSI1O43347 MIR4496-201ENST00000635896 61 ntBASIC3.96□□□□□ -1.78
MSI1O43347 AC099654.12-201ENST00000639868 649 ntBASIC3.96□□□□□ -1.78
MSI1O43347 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
MSI1O43347 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
MSI1O43347 IPO8P1-201ENST00000455509 3109 ntBASIC3.96□□□□□ -1.78
MSI1O43347 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.96□□□□□ -1.78
MSI1O43347 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MSI1O43347 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.96□□□□□ -1.78
MSI1O43347 PABPC1P7-201ENST00000413177 1513 ntBASIC3.95□□□□□ -1.78
MSI1O43347 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
MSI1O43347 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MSI1O43347 AL139811.1-201ENST00000424779 2299 ntBASIC3.95□□□□□ -1.78
MSI1O43347 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.95□□□□□ -1.78
MSI1O43347 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
MSI1O43347 RNY4P24-201ENST00000362735 96 ntBASIC3.95□□□□□ -1.78
MSI1O43347 RNVU1-3-201ENST00000364313 161 ntBASIC3.95□□□□□ -1.78
MSI1O43347 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms