Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN3O15551 AP003485.1-201ENST00000625093 753 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN3O15551 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN3O15551 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN3O15551 AP005901.5-201ENST00000545779 1796 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN3O15551 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CLDN3O15551 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN3O15551 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CLDN3O15551 RNU5D-1-201ENST00000363299 116 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 RNU6-224P-201ENST00000384055 107 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CLDN3O15551 MTCO1P56-201ENST00000401674 224 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 SSXP9-201ENST00000417503 292 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 MTATP6P4-201ENST00000427725 675 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN3O15551 RAC1P7-201ENST00000445367 377 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 MTCYBP11-201ENST00000447254 1109 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 NANOGNBP1-201ENST00000448444 480 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 AC005297.2-201ENST00000450430 606 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN3O15551 AC069528.1-202ENST00000482888 637 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 DSTNP2-201ENST00000504533 515 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN3O15551 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN3O15551 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CLDN3O15551 LRRC6P1-201ENST00000532188 885 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN3O15551 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN3O15551 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN3O15551 AC005951.1-201ENST00000576706 485 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 AC245036.5-201ENST00000596330 847 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 AL390838.2-201ENST00000602394 274 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 AC093732.2-201ENST00000607950 274 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 AC009570.1-201ENST00000609599 745 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 AC135507.2-201ENST00000612443 309 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN3O15551 CUL1P1-201ENST00000509510 2425 ntBASIC3.25□□□□□ -1.89
CLDN3O15551 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN3O15551 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN3O15551 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN3O15551 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN3O15551 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN3O15551 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN3O15551 SNORA44-201ENST00000384584 132 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 RPS3AP26-201ENST00000398259 784 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 UBA52P6-201ENST00000399822 382 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN3O15551 USP9YP22-201ENST00000438971 294 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 OR6K5P-201ENST00000447050 945 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 AC026410.2-201ENST00000460281 156 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 RPS15AP17-201ENST00000470598 390 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN3O15551 AC104986.1-201ENST00000517978 436 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 AC087808.1-201ENST00000520501 361 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN3O15551 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN3O15551 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.24□□□□□ -1.89
CLDN3O15551 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN3O15551 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN3O15551 AC107016.2-201ENST00000547968 190 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 SETP7-201ENST00000552169 453 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN3O15551 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN3O15551 AL451007.1-201ENST00000595491 289 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN3O15551 AC009220.3-201ENST00000604318 586 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 AC106791.2-201ENST00000604680 391 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 AC073387.2-201ENST00000604797 784 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 AL160281.1-201ENST00000605307 311 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 AC084824.4-201ENST00000620106 731 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.24□□□□□ -1.89
CLDN3O15551 MTND5P27-201ENST00000428871 1720 ntBASIC3.24□□□□□ -1.89
CLDN3O15551 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CLDN3O15551 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN3O15551 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CLDN3O15551 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN3O15551 SNRPEP3-201ENST00000338402 276 ntBASIC3.23□□□□□ -1.89
CLDN3O15551 RNU6-525P-201ENST00000363685 104 ntBASIC3.23□□□□□ -1.89
CLDN3O15551 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN3O15551 RNU6-882P-201ENST00000391025 103 ntBASIC3.23□□□□□ -1.89
CLDN3O15551 AL136372.1-201ENST00000403060 228 ntBASIC3.23□□□□□ -1.89
CLDN3O15551 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.23□□□□□ -1.89
CLDN3O15551 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
CLDN3O15551 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.23□□□□□ -1.89
CLDN3O15551 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN3O15551 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.23□□□□□ -1.89
CLDN3O15551 HSPE1P1-201ENST00000421494 318 ntBASIC3.23□□□□□ -1.89
CLDN3O15551 RPL21P40-201ENST00000428586 483 ntBASIC3.23□□□□□ -1.89
CLDN3O15551 MTND2P5-201ENST00000432656 1006 ntBASIC3.23□□□□□ -1.89
CLDN3O15551 AL121871.1-201ENST00000443413 436 ntBASIC3.23□□□□□ -1.89
CLDN3O15551 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN3O15551 RN7SL633P-201ENST00000488974 297 ntBASIC3.23□□□□□ -1.89
CLDN3O15551 AC092185.1-201ENST00000491371 97 ntBASIC3.23□□□□□ -1.89
CLDN3O15551 AC023424.2-201ENST00000493479 777 ntBASIC3.23□□□□□ -1.89
CLDN3O15551 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN3O15551 AC010374.2-201ENST00000512933 535 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms