Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MTCO3P1-205ENST00000422088 832 ntBASIC2.85□□□□□ -1.95
LSM1O15116 HMGN2P30-201ENST00000423237 256 ntBASIC2.85□□□□□ -1.95
LSM1O15116 PSMA6P3-201ENST00000428242 164 ntBASIC2.85□□□□□ -1.95
LSM1O15116 RPS29P6-201ENST00000438196 145 ntBASIC2.85□□□□□ -1.95
LSM1O15116 AL591503.2-201ENST00000442314 1005 ntBASIC2.85□□□□□ -1.95
LSM1O15116 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.85□□□□□ -1.95
LSM1O15116 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.85□□□□□ -1.95
LSM1O15116 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.85□□□□□ -1.95
LSM1O15116 FTH1P2-201ENST00000466086 412 ntBASIC2.85□□□□□ -1.95
LSM1O15116 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.85□□□□□ -1.95
LSM1O15116 RPS29P2-201ENST00000479278 136 ntBASIC2.85□□□□□ -1.95
LSM1O15116 AC013828.1-201ENST00000481845 158 ntBASIC2.85□□□□□ -1.95
LSM1O15116 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.85□□□□□ -1.95
LSM1O15116 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LSM1O15116 AC026414.1-201ENST00000504046 698 ntBASIC2.85□□□□□ -1.95
LSM1O15116 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.85□□□□□ -1.95
LSM1O15116 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.85□□□□□ -1.95
LSM1O15116 RAC1P5-201ENST00000512182 576 ntBASIC2.85□□□□□ -1.95
LSM1O15116 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.85□□□□□ -1.95
LSM1O15116 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.85□□□□□ -1.95
LSM1O15116 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.85□□□□□ -1.95
LSM1O15116 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.85□□□□□ -1.95
LSM1O15116 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.85□□□□□ -1.95
LSM1O15116 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
LSM1O15116 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.85□□□□□ -1.95
LSM1O15116 DUXAP3-201ENST00000603616 594 ntBASIC2.85□□□□□ -1.95
LSM1O15116 AC092954.1-201ENST00000609121 445 ntBASIC2.85□□□□□ -1.95
LSM1O15116 AC078880.5-201ENST00000617845 421 ntBASIC2.85□□□□□ -1.95
LSM1O15116 AC002064.3-201ENST00000623448 346 ntBASIC2.85□□□□□ -1.95
LSM1O15116 AC010297.1-201ENST00000623948 149 ntBASIC2.85□□□□□ -1.95
LSM1O15116 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LSM1O15116 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LSM1O15116 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LSM1O15116 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.84□□□□□ -1.95
LSM1O15116 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LSM1O15116 SNORA63.1-201ENST00000362493 131 ntBASIC2.84□□□□□ -1.95
LSM1O15116 RNU6-492P-201ENST00000363035 104 ntBASIC2.84□□□□□ -1.95
LSM1O15116 RNA5SP393-201ENST00000363423 117 ntBASIC2.84□□□□□ -1.95
LSM1O15116 RNU6-1066P-201ENST00000363573 105 ntBASIC2.84□□□□□ -1.95
LSM1O15116 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.84□□□□□ -1.95
LSM1O15116 SNORD21-201ENST00000383953 95 ntBASIC2.84□□□□□ -1.95
LSM1O15116 RNU2-28P-201ENST00000410457 189 ntBASIC2.84□□□□□ -1.95
LSM1O15116 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.84□□□□□ -1.95
LSM1O15116 AC092634.2-201ENST00000428146 1010 ntBASIC2.84□□□□□ -1.95
LSM1O15116 RPL36AP6-201ENST00000435770 321 ntBASIC2.84□□□□□ -1.95
LSM1O15116 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LSM1O15116 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.84□□□□□ -1.95
LSM1O15116 RPL9P33-201ENST00000484311 566 ntBASIC2.84□□□□□ -1.95
LSM1O15116 AC010625.1-201ENST00000511296 403 ntBASIC2.84□□□□□ -1.95
LSM1O15116 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.84□□□□□ -1.95
LSM1O15116 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LSM1O15116 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.84□□□□□ -1.95
LSM1O15116 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.84□□□□□ -1.95
LSM1O15116 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.84□□□□□ -1.95
LSM1O15116 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.84□□□□□ -1.95
LSM1O15116 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.84□□□□□ -1.95
LSM1O15116 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LSM1O15116 AC090330.1-201ENST00000588646 764 ntBASIC2.84□□□□□ -1.95
LSM1O15116 AC010975.3-201ENST00000618727 978 ntBASIC2.84□□□□□ -1.95
LSM1O15116 AC244100.1-202ENST00000621554 382 ntBASIC2.84□□□□□ -1.95
LSM1O15116 AC026422.1-201ENST00000623961 452 ntBASIC2.84□□□□□ -1.95
LSM1O15116 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
LSM1O15116 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
LSM1O15116 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.84□□□□□ -1.96
LSM1O15116 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.83□□□□□ -1.96
LSM1O15116 AC010680.1-201ENST00000590024 3590 ntBASIC2.83□□□□□ -1.96
LSM1O15116 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.83□□□□□ -1.96
LSM1O15116 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.83□□□□□ -1.96
LSM1O15116 HMGB1P5-201ENST00000255320 642 ntBASIC2.83□□□□□ -1.96
LSM1O15116 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LSM1O15116 AL672167.1-206ENST00000356293 943 ntBASIC2.83□□□□□ -1.96
LSM1O15116 RNA5SP139-201ENST00000364340 117 ntBASIC2.83□□□□□ -1.96
LSM1O15116 RNA5SP267-201ENST00000364893 126 ntBASIC2.83□□□□□ -1.96
LSM1O15116 MIR135A2-201ENST00000384854 100 ntBASIC2.83□□□□□ -1.96
LSM1O15116 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LSM1O15116 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LSM1O15116 MCTS2P-201ENST00000394552 546 ntBASIC2.83□□□□□ -1.96
LSM1O15116 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.83□□□□□ -1.96
LSM1O15116 RNA5SP120-201ENST00000410900 112 ntBASIC2.83□□□□□ -1.96
LSM1O15116 USP9YP19-201ENST00000412165 485 ntBASIC2.83□□□□□ -1.96
LSM1O15116 AL137014.1-201ENST00000420490 1226 ntBASIC2.83□□□□□ -1.96
LSM1O15116 LSM1P1-201ENST00000438629 273 ntBASIC2.83□□□□□ -1.96
LSM1O15116 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.83□□□□□ -1.96
LSM1O15116 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.83□□□□□ -1.96
LSM1O15116 AP000705.1-201ENST00000454567 350 ntBASIC2.83□□□□□ -1.96
LSM1O15116 AC027673.1-201ENST00000456245 405 ntBASIC2.83□□□□□ -1.96
LSM1O15116 DYNLL1P6-201ENST00000503440 264 ntBASIC2.83□□□□□ -1.96
LSM1O15116 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.83□□□□□ -1.96
LSM1O15116 snoZ278.1-201ENST00000517059 112 ntBASIC2.83□□□□□ -1.96
LSM1O15116 AC087373.1-201ENST00000524920 491 ntBASIC2.83□□□□□ -1.96
LSM1O15116 AC113192.3-201ENST00000529152 742 ntBASIC2.83□□□□□ -1.96
LSM1O15116 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LSM1O15116 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.83□□□□□ -1.96
LSM1O15116 NBEAP1-201ENST00000554452 979 ntBASIC2.83□□□□□ -1.96
LSM1O15116 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.83□□□□□ -1.96
LSM1O15116 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.83□□□□□ -1.96
LSM1O15116 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.83□□□□□ -1.96
LSM1O15116 MIR5004-201ENST00000579078 107 ntBASIC2.83□□□□□ -1.96
LSM1O15116 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.83□□□□□ -1.96
LSM1O15116 AC020895.1-201ENST00000595362 272 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 298.8 ms