Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.98□□□□□ -2.09
SDCBPO00560 HSFY3P-201ENST00000444242 1191 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 RPS26P56-201ENST00000444468 240 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AC092685.1-201ENST00000447960 1243 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AC004924.1-201ENST00000480160 781 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 LINC00888-204ENST00000487386 421 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 OR52A4P-203ENST00000498233 1014 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AC096751.1-202ENST00000502691 1067 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AC009901.1-201ENST00000506703 541 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 RPL37P25-201ENST00000507308 276 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AC107222.1-201ENST00000510899 637 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AC104057.1-201ENST00000515547 497 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 RNA5SP148-201ENST00000516527 94 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AP000889.2-201ENST00000532684 490 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.98□□□□□ -2.09
SDCBPO00560 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.98□□□□□ -2.09
SDCBPO00560 GLUD1P4-201ENST00000590914 418 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.98□□□□□ -2.09
SDCBPO00560 AC128687.1-201ENST00000605304 619 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AC090116.1-201ENST00000615679 446 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AC007275.1-201ENST00000621243 671 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AL360181.4-201ENST00000621752 134 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AC024595.1-201ENST00000623088 387 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.98□□□□□ -2.09
SDCBPO00560 AL160394.1-201ENST00000624765 724 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 AC083865.1-201ENST00000636634 831 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SDCBPO00560 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SDCBPO00560 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SDCBPO00560 ZNF90P1-201ENST00000480493 1951 ntBASIC1.98□□□□□ -2.09
SDCBPO00560 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SDCBPO00560 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.97□□□□□ -2.09
SDCBPO00560 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.97□□□□□ -2.09
SDCBPO00560 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SDCBPO00560 RNU6-1151P-201ENST00000384684 107 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 MIR518C-201ENST00000384822 101 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SDCBPO00560 TAF9BP2-201ENST00000400856 499 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 SSXP10-201ENST00000402595 565 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 UBE2V2P3-201ENST00000433562 437 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 LSM1P1-201ENST00000438629 273 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 AC108938.1-201ENST00000451204 136 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.97□□□□□ -2.09
SDCBPO00560 AC010625.1-201ENST00000511296 403 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 RAC1P5-201ENST00000512182 576 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.97□□□□□ -2.09
SDCBPO00560 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 RNA5SP24-201ENST00000516478 95 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 RNU6-551P-201ENST00000516661 103 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 RNA5SP82-201ENST00000516707 92 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 AC087373.1-201ENST00000524920 491 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.97□□□□□ -2.09
SDCBPO00560 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.97□□□□□ -2.09
SDCBPO00560 AC021269.2-201ENST00000532318 330 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 SNRPGP16-201ENST00000533275 226 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.97□□□□□ -2.09
SDCBPO00560 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.97□□□□□ -2.09
SDCBPO00560 AC020895.1-201ENST00000595362 272 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 AC245036.5-201ENST00000596330 847 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 AL137843.1-201ENST00000605078 385 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 AC008083.4-201ENST00000615076 444 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 MIR6076-201ENST00000617521 113 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.97□□□□□ -2.09
SDCBPO00560 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 AC090617.9-201ENST00000623751 147 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 AC092608.3-201ENST00000625017 386 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 AC097372.4-201ENST00000625025 466 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 AC017104.5-201ENST00000637647 639 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SDCBPO00560 BX649567.1-201ENST00000642071 1134 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 AC012321.1-201ENST00000561622 1588 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 AC244517.1-201ENST00000606030 2086 ntBASIC1.97□□□□□ -2.09
SDCBPO00560 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
SDCBPO00560 AC097714.1-201ENST00000511272 1647 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
SDCBPO00560 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SDCBPO00560 NDUFB4P4-201ENST00000404822 243 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 ARL2BPP3-201ENST00000421226 480 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.96□□□□□ -2.1
SDCBPO00560 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.96□□□□□ -2.1
SDCBPO00560 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.96□□□□□ -2.1
SDCBPO00560 MTCYBP34-201ENST00000439552 670 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.96□□□□□ -2.1
SDCBPO00560 AL034418.1-201ENST00000448675 860 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.96□□□□□ -2.1
SDCBPO00560 RPL30P14-201ENST00000482744 348 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 RPL36AP51-201ENST00000487216 318 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SDCBPO00560 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.96□□□□□ -2.1
SDCBPO00560 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.96□□□□□ -2.1
SDCBPO00560 XKRY-201ENST00000510392 1100 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 AC026436.1-201ENST00000510537 270 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.96□□□□□ -2.1
SDCBPO00560 TTC39CP1-201ENST00000512513 755 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.96□□□□□ -2.1
SDCBPO00560 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.96□□□□□ -2.1
SDCBPO00560 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.96□□□□□ -2.1
SDCBPO00560 RPL7P20-201ENST00000520308 745 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.96□□□□□ -2.1
SDCBPO00560 OR4R1P-201ENST00000529879 463 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms