Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 BX664727.1-201ENST00000416024 466 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 AC099677.1-201ENST00000420575 175 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.47□□□□□ -2.01
UPK1AO00322 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.47□□□□□ -2.01
UPK1AO00322 AC079780.1-201ENST00000428259 207 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.47□□□□□ -2.01
UPK1AO00322 MTCYBP34-201ENST00000439552 670 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 RPL23AP20-201ENST00000447965 421 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 MTND2P19-201ENST00000449129 1012 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.47□□□□□ -2.01
UPK1AO00322 AL445669.2-201ENST00000454425 421 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 AC008379.1-201ENST00000463655 464 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 HMGB1P25-201ENST00000468402 607 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 PABPC1P3-201ENST00000469174 459 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.47□□□□□ -2.01
UPK1AO00322 AC096751.1-202ENST00000502691 1067 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 AIG1P1-201ENST00000503376 148 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 AC097462.2-201ENST00000504623 481 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.47□□□□□ -2.01
UPK1AO00322 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.47□□□□□ -2.01
UPK1AO00322 SNORA31.8-201ENST00000516327 108 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 SNORA31.21-201ENST00000517180 77 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 ERHP1-201ENST00000523006 310 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 AP000790.1-201ENST00000528891 737 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 AC090695.1-201ENST00000561269 1222 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
UPK1AO00322 MIR4789-201ENST00000577469 82 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 AC124283.4-201ENST00000581815 456 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 ELOCP29-201ENST00000588193 334 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 AC002487.1-201ENST00000604565 994 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.47□□□□□ -2.01
UPK1AO00322 AC079228.1-201ENST00000624774 1049 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.47□□□□□ -2.01
UPK1AO00322 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.01
UPK1AO00322 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.46□□□□□ -2.02
UPK1AO00322 NUP58P1-201ENST00000502546 1738 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 AL049780.3-201ENST00000624612 1583 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
UPK1AO00322 RNU1-100P-201ENST00000365255 165 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
UPK1AO00322 MIR483-201ENST00000385070 76 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 RNU6-932P-201ENST00000391108 106 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 AL024474.1-201ENST00000404655 591 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 AL139098.1-201ENST00000407291 389 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
UPK1AO00322 RNA5SP181-201ENST00000410246 98 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 RNU6-1077P-201ENST00000410506 102 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.46□□□□□ -2.02
UPK1AO00322 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.46□□□□□ -2.02
UPK1AO00322 TAF13P2-201ENST00000416876 286 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 RPL21P32-201ENST00000419877 477 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.46□□□□□ -2.02
UPK1AO00322 AC233728.2-201ENST00000425348 757 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.46□□□□□ -2.02
UPK1AO00322 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.46□□□□□ -2.02
UPK1AO00322 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.46□□□□□ -2.02
UPK1AO00322 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.46□□□□□ -2.02
UPK1AO00322 RNU7-140P-201ENST00000459546 60 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.46□□□□□ -2.02
UPK1AO00322 AC078857.1-201ENST00000469870 667 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 SRIP1-201ENST00000489235 288 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.46□□□□□ -2.02
UPK1AO00322 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.46□□□□□ -2.02
UPK1AO00322 MTND5P4-201ENST00000514978 288 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.46□□□□□ -2.02
UPK1AO00322 AC100870.1-201ENST00000522035 505 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 OR8K2P-201ENST00000524645 927 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.46□□□□□ -2.02
UPK1AO00322 AC018630.1-201ENST00000541376 925 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
UPK1AO00322 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.46□□□□□ -2.02
UPK1AO00322 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.46□□□□□ -2.02
UPK1AO00322 AC093519.1-201ENST00000566109 298 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.46□□□□□ -2.02
UPK1AO00322 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.46□□□□□ -2.02
UPK1AO00322 AC073387.2-201ENST00000604797 784 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 ATP1B3P1-201ENST00000605365 821 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
UPK1AO00322 AL137847.3-201ENST00000611521 109 ntBASIC2.46□□□□□ -2.02
UPK1AO00322 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.46□□□□□ -2.02
UPK1AO00322 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UPK1AO00322 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.46□□□□□ -2.02
UPK1AO00322 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.46□□□□□ -2.02
UPK1AO00322 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
UPK1AO00322 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.46□□□□□ -2.02
UPK1AO00322 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
UPK1AO00322 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.45□□□□□ -2.02
UPK1AO00322 RNU6-609P-201ENST00000365459 107 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
UPK1AO00322 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
UPK1AO00322 U6.112-201ENST00000384129 70 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.45□□□□□ -2.02
UPK1AO00322 AC005345.1-201ENST00000431868 217 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 CR769767.1-201ENST00000436337 346 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 AC000041.1-201ENST00000439655 175 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.45□□□□□ -2.02
UPK1AO00322 AC011816.1-201ENST00000441346 546 ntBASIC2.45□□□□□ -2.02
UPK1AO00322 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms