Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL592310.1-201ENST00000414330 671 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM1O00151 AL389915.1-201ENST00000422463 466 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 AC019178.2-201ENST00000423595 505 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.14□□□□□ -1.91
PDLIM1O00151 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM1O00151 AC084290.1-201ENST00000434995 374 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 MTND4P6-201ENST00000438297 472 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 AC092641.1-201ENST00000440229 772 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 PDSS1P2-201ENST00000449397 678 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 AC005297.2-201ENST00000450430 606 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 RPL21P134-201ENST00000453468 483 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 RPL18AP17-201ENST00000455326 198 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 RPS23P3-201ENST00000470993 430 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.14□□□□□ -1.91
PDLIM1O00151 TMEM251P1-201ENST00000503717 318 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 AC114981.1-201ENST00000503897 678 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.14□□□□□ -1.91
PDLIM1O00151 AC079395.1-201ENST00000510981 262 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 RNU6-311P-201ENST00000516224 102 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 RNY4P37-201ENST00000516225 96 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.14□□□□□ -1.91
PDLIM1O00151 MTND2P32-201ENST00000521584 1038 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM1O00151 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM1O00151 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM1O00151 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.14□□□□□ -1.91
PDLIM1O00151 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM1O00151 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.14□□□□□ -1.91
PDLIM1O00151 AC006116.10-201ENST00000591836 581 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 AC009220.3-201ENST00000604318 586 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 AL450336.1-201ENST00000605180 586 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 AC080013.4-201ENST00000607624 649 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 AP000240.1-201ENST00000609910 452 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 MIR7851-201ENST00000610611 160 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 MIR6075-201ENST00000620782 95 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.14□□□□□ -1.91
PDLIM1O00151 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PDLIM1O00151 AC002546.1-201ENST00000588041 2504 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.13□□□□□ -1.91
PDLIM1O00151 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PDLIM1O00151 SNORA71.3-201ENST00000362582 128 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 AL139095.1-201ENST00000404326 391 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.13□□□□□ -1.91
PDLIM1O00151 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.13□□□□□ -1.91
PDLIM1O00151 HMGN2P31-201ENST00000432430 273 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 RPL17P49-201ENST00000443728 411 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.13□□□□□ -1.91
PDLIM1O00151 RPL21P23-201ENST00000446654 460 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 VN1R34P-201ENST00000447387 883 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 AC115115.1-201ENST00000449927 248 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.13□□□□□ -1.91
PDLIM1O00151 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.13□□□□□ -1.91
PDLIM1O00151 snoU109.4-201ENST00000458953 143 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 HMGB1P25-201ENST00000468402 607 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 AC068724.1-201ENST00000487100 792 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 FAM172BP-201ENST00000487497 1089 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 RPL7P38-201ENST00000488396 739 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 AC090453.1-201ENST00000495560 436 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.13□□□□□ -1.91
PDLIM1O00151 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.13□□□□□ -1.91
PDLIM1O00151 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.13□□□□□ -1.91
PDLIM1O00151 AC022861.1-201ENST00000522981 663 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 AC103843.2-201ENST00000530523 682 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.13□□□□□ -1.91
PDLIM1O00151 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.13□□□□□ -1.91
PDLIM1O00151 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.13□□□□□ -1.91
PDLIM1O00151 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PDLIM1O00151 AC087481.2-201ENST00000565492 330 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.13□□□□□ -1.91
PDLIM1O00151 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
PDLIM1O00151 MIR3922-201ENST00000585192 84 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 AL109653.1-201ENST00000603091 248 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PDLIM1O00151 AC006386.1-201ENST00000619436 415 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 AC004009.2-201ENST00000623016 728 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 AC243312.2-201ENST00000623340 601 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.13□□□□□ -1.91
PDLIM1O00151 AC092435.3-201ENST00000565538 3654 ntBASIC3.13□□□□□ -1.91
PDLIM1O00151 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.12□□□□□ -1.91
PDLIM1O00151 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PDLIM1O00151 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
PDLIM1O00151 RNA5SP197-201ENST00000363357 119 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PDLIM1O00151 SNORD51-201ENST00000384320 80 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 ANAPC10P1-201ENST00000395991 556 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 AL591034.1-201ENST00000407447 340 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 HMGN2P35-201ENST00000412164 270 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 RAP1BP1-201ENST00000412709 553 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM1O00151 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM1O00151 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.12□□□□□ -1.91
PDLIM1O00151 ATP5JP1-201ENST00000431631 322 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 MTND4LP10-201ENST00000435146 291 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.12□□□□□ -1.91
PDLIM1O00151 COX7BP2-201ENST00000437976 242 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 TRGVB-201ENST00000453257 471 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms